PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021101
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family TALE
Protein Properties Length: 580aa    MW: 64837.3 Da    PI: 6.5552
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41968899PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-449160989PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.41.2e-083523891954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                Fe   ++yp+  ++  LA+++gL+ +qV++WF N R +
  Aan021101 352 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 389
                554459******************************88 PP
2BELL121.24.4e-39213284172
       BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                e++elqk+k+kLl++leeVd+rYk+y++q+++v+ssFeavag g+ak+Y slA+ka+SrhFrcL+d i++qi
  Aan021101 213 EFMELQKRKTKLLQMLEEVDRRYKHYCDQMKAVVSSFEAVAGNGAAKVYSSLASKAMSRHFRCLRDGIVNQI 284
                679********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.6E-60146282IPR006563POX domain
PfamPF075261.3E-48152280IPR006563POX domain
PROSITE profilePS5007111.985330393IPR001356Homeobox domain
SMARTSM003891.6E-8333397IPR001356Homeobox domain
CDDcd000865.58E-11333394No hitNo description
SuperFamilySSF466895.99E-17334400IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-27336399IPR009057Homeodomain-like
PfamPF059202.8E-17350389IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MDSSTGNYNC YPHDDDDHNH HVNSSSNPNA TTSFETSPLG IFNFEAHNSV SHNADFYNFD  60
ESSLQRCVFP CEPNERPSQG LSLSLSSANP STIGLQQFEL VRPQEHHYQN HPGYFGKSMS  120
MDQDHHHHQD MMNHVSDDGG GYNHHQGAQF NIRSSKYLFP AQELLNEFCN LGSKQSDHSS  180
KAKAASTTSN QWQNHDSLNN ASASKSKSLS SVEFMELQKR KTKLLQMLEE VDRRYKHYCD  240
QMKAVVSSFE AVAGNGAAKV YSSLASKAMS RHFRCLRDGI VNQIKSTKVA MGEKDVSAPG  300
SSRGETPRLR VLDQTLRQQR AFQQMTLMDN HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP  360
NDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYV EETKASQDTM ESTSDGFNPN  420
SQIDQKPTID ELVRIDSECL SSIINHPEKM DHISHSKTHD HRDFHHNYPR ITSSFGAVEL  480
DFSTYNNHSF GGGDGSGGVS LTLGLQQHGG NGAGDGGVGA DAGVSLAFSS SSQSALFYPR  540
DNNDDCQPAV QYSSLLEGDQ VQNLPYRNLM GAQLLHDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-15339397563Homeobox protein Meis2
4xrm_B2e-15339397563Homeobox protein Meis2
4xrs_A2e-15339396158Homeobox protein Meis1
4xrs_B2e-15339396158Homeobox protein Meis1
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Early expression is detected in the inflorescence apex of developing flowers and also in the ovule primordium and the integuments. {ECO:0000269|PubMed:8521490}.
UniprotTISSUE SPECIFICITY: Expressed in both floral and vegetative tissues. {ECO:0000269|PubMed:8521490}.
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024986770.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-153BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2U1QH110.0A0A2U1QH11_ARTAN; Homeobox KN domain-containing protein
STRINGEOY248260.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-127TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]