PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan019442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | HSF | ||||||||
Protein Properties | Length: 75aa MW: 8270.16 Da PI: 4.2858 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 49.6 | 1.1e-15 | 30 | 74 | 2 | 46 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHST CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFk 46 Fl k+y++++d+++++++sws+ +n+fvv+d+ efak++LpkyFk Aan019442 30 FLVKTYDMVDDPSTDKVVSWSAANNTFVVWDPPEFAKDLLPKYFK 74 9********************999********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 1.3E-17 | 22 | 74 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SuperFamily | SSF46785 | 5.51E-15 | 25 | 74 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM00415 | 2.6E-5 | 26 | 75 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Pfam | PF00447 | 6.1E-12 | 30 | 74 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.2E-8 | 30 | 53 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.2E-8 | 68 | 75 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
MEPQQPPPRS NDGAAIPPPP MPAANAPPPF LVKTYDMVDD PSTDKVVSWS AANNTFVVWD 60 PPEFAKDLLP KYFKX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015160909.1 | 4e-29 | PREDICTED: heat shock factor protein HSF8 isoform X1 | ||||
Refseq | XP_015160911.1 | 4e-29 | PREDICTED: heat shock factor protein HSF8 isoform X2 | ||||
Swissprot | Q40152 | 6e-23 | HSF8_SOLLC; Heat shock factor protein HSF8 | ||||
TrEMBL | A0A314L0P4 | 5e-27 | A0A314L0P4_NICAT; Heat shock factor protein hsf8 | ||||
TrEMBL | S8CTT4 | 2e-27 | S8CTT4_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009781208.1 | 1e-27 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17750.1 | 2e-21 | heat shock factor 1 |
Publications ? help Back to Top | |||
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