PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan018076

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

VOZ

Protein Properties

Length: 315aa MW: 35273.9 Da PI: 8.1911

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41939310	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-109538	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	403.1	6e-124	66	290	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg........sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsaflgpkcalwdc+rpaqg + w+ dycss+ha++a neg g+tpv+rpkgi+lkd+llfaalsak+qgk+vg+pecegaatakspwna Aan018076 66 PPPSAFLGPKCALWDCPRPAQGwcaesrpvQGWFPDYCSSLHAAIAQNEGRFGMTPVIRPKGIELKDTLLFAALSAKTQGKDVGVPECEGAATAKSPWNA 165 89*****************9554444434699************************************************************** PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 +elfdls++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++e g lkrsyymdpqp++ +ewhlyeyei+++da+alyrlelklvd+ Aan018076 166 PELFDLSVFEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINESGWLKRSYYMDPQPMKFLEWHLYEYEISKCDACALYRLELKLVDG 265 ************************************************************************************************ PP VOZ 193 kksakgkvskdsladlqkklgrlta 217 kks+kgk+++ s+adlqk++ rlta Aan018076 266 KKSPKGKIANVSVADLQKQMRRLTA 290 *********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
IDQCKGSPSG VNNIGAHNIG VANQLDYFSF DLPQDFEQNF FTGFNGMGQE DASLNQMTGY 60 LPTISPPPSA FLGPKCALWD CPRPAQGWCA ESRPVQGWFP DYCSSLHAAI AQNEGRFGMT 120 PVIRPKGIEL KDTLLFAALS AKTQGKDVGV PECEGAATAK SPWNAPELFD LSVFEGETIR 180 EWLFFDKPRR AFESGNRKQR SLPDYNGRGW HESRKQVINE SGWLKRSYYM DPQPMKFLEW 240 HLYEYEISKC DACALYRLEL KLVDGKKSPK GKIANVSVAD LQKQMRRLTA EFPLDNNTKR 300 SVKGRGKASV KDNSG

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023746822.1	0.0	transcription factor VOZ1
Refseq	XP_023746823.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-143	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2U1KCY6	0.0	A0A2U1KCY6_ARTAN; Vascular plant one zinc finger protein
TrEMBL	A0A2U1NT53	0.0	A0A2U1NT53_ARTAN; Vascular plant one zinc finger protein
STRING	VIT_10s0003g00500.t01	1e-164	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-145	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]