PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016676
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 302aa    MW: 34598.2 Da    PI: 7.0016
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-542160997PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.45.3e-27120178259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs +prsYYrC+s+  C+++++ve+s +d ++ + tY+ +Hnh+
  Aan016676 120 SDPWAWRKYGQKPIKGSIYPRSYYRCSSSkACMARRQVEQSCTDSSIYILTYTADHNHP 178
                699************************9989***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-27105180IPR003657WRKY domain
PROSITE profilePS5081129.413114180IPR003657WRKY domain
SuperFamilySSF1182903.92E-24116180IPR003657WRKY domain
SMARTSM007741.5E-29119179IPR003657WRKY domain
PfamPF031061.1E-22121178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
GSIDIKKEYD QALLFCYPHL FDNNNNHDGT ARDELNQLYK PFYNPVYDNE NEFRGATLPE  60
NDLKTIQHHD FDHQEVQQDK NIKNFCGSSS NISQLAPKLK KRKNQQKRVV VQVTADGLTS  120
DPWAWRKYGQ KPIKGSIYPR SYYRCSSSKA CMARRQVEQS CTDSSIYILT YTADHNHPQP  180
TRRNSLAGIN RNRFKATPKS PTISEDGSKA VTKLKDSPFN SPTTPSASSM DDEVLQQPNI  240
KQETTFYNKY DDQGPTMMSG FNDDELMHFN DDFFEGLEDL VGYKTDTSSQ ISSNKQFPHV  300
FS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-171201811780Disease resistance protein RRS1
5w3x_D5e-171201811780Disease resistance protein RRS1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.193180.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994816.11e-152probable WRKY transcription factor 29
TrEMBLA0A2U1Q7510.0A0A2U1Q751_ARTAN; DNA-binding WRKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.14e-38WRKY DNA-binding protein 27