PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014605
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 331aa    MW: 37348.6 Da    PI: 6.9318
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S56531895PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-35067PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +v+q+G+g+W+ ++   g++R+ k+c++rw +yl
        Aan014605 14 KGPWTPEEDIMLVSYVQQHGPGNWRQVPTNTGLRRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding48.22.6e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T +E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
        Aan014605  67 RGDFTDDEEKMIIQLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112
                      899*******************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-24564IPR009057Homeodomain-like
PROSITE profilePS5129425.42965IPR017930Myb domain
SuperFamilySSF466893.33E-3111108IPR009057Homeodomain-like
SMARTSM007177.0E-151363IPR001005SANT/Myb domain
PfamPF002492.5E-161461IPR001005SANT/Myb domain
CDDcd001674.25E-111661No hitNo description
Gene3DG3DSA:1.10.10.602.6E-2465116IPR009057Homeodomain-like
SMARTSM007172.7E-1566114IPR001005SANT/Myb domain
PROSITE profilePS5129420.14566116IPR017930Myb domain
PfamPF002491.8E-1467112IPR001005SANT/Myb domain
CDDcd001675.03E-1170112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MGRPPCCDKL GVKKGPWTPE EDIMLVSYVQ QHGPGNWRQV PTNTGLRRCS KSCRLRWTNY  60
LRPGIRRGDF TDDEEKMIIQ LQALLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLRKLE  120
MGSEEQDLNH DNKDRFACST TSSSSSHCMS RGQWEKRLQT DIHLAKQALS DALSVDRKPI  180
FATQTTKPST QTPAYPSSTD NIAKLLKGFM KKSPKITKTS SNSSTHESSG EVNVLSSESK  240
SNSGVNLSQA FESLFGFNQC FESPDNSDLS HSNTSPEGSI FQGESKEELR FTMFENWLLD  300
DQTVGGVVVH QGKEDLTNFS FDDENPNFFD N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C9e-261411627128MYB TRANSFORMING PROTEIN
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in germinating seeds, rosette and cauline leaves, flower buds, open flowers, stems and developing siliques. {ECO:0000269|PubMed:25305760}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in the activation of cuticular wax biosynthesis under drought stress. Binds directly to the promoters of genes involved in cuticular wax biosynthesis. Transactivates WSD1, KCS2/DAISY, CER1, CER2, FAR3 and ECR genes (PubMed:25305760, PubMed:27577115). Functions together with MYB96 in the activation of cuticular wax biosynthesis (PubMed:27577115). {ECO:0000269|PubMed:25305760, ECO:0000269|PubMed:27577115}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress, osmotic shock and abscisic acid (ABA). {ECO:0000269|PubMed:25305760}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023758366.10.0transcription factor MYB30-like
SwissprotQ9SN781e-105MYB94_ARATH; Transcription factor MYB94
TrEMBLA0A2U1L5550.0A0A2U1L555_ARTAN; Myb domain protein 30
STRINGXP_006431144.11e-123(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-102myb domain protein 94
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Cui F, et al.
    Dissecting Abscisic Acid Signaling Pathways Involved in Cuticle Formation.
    Mol Plant, 2016. 9(6): p. 926-38
    [PMID:27060495]
  4. Lee SB,Kim HU,Suh MC
    MYB94 and MYB96 Additively Activate Cuticular Wax Biosynthesis in Arabidopsis.
    Plant Cell Physiol., 2016. 57(11): p. 2300-2311
    [PMID:27577115]