PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan008819 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 205aa MW: 22922.6 Da PI: 5.3823 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.2e-17 | 40 | 90 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg++ +e+Aa+a++ a+++++g Aan008819 40 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYRNPEMAARAHDVAALSIKG 90 68*****998.**********843...6***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.0E-11 | 40 | 90 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.326 | 41 | 98 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-30 | 41 | 99 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-33 | 41 | 104 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-21 | 41 | 99 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.3E-9 | 42 | 53 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.03E-30 | 42 | 100 | No hit | No description |
PRINTS | PR00367 | 3.3E-9 | 64 | 80 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MSSELDDCSS NSQPSSPINK PQKVKNRSNK RNRDTSMKHP VYRGVRMRNW GKWVSEIREP 60 RKKSRIWLGT YRNPEMAARA HDVAALSIKG NSAIINFPEL VGALPRPVSS SPRDVQAAAA 120 KAAAMENFDF PSVSESSEEL SEITQLPILE PGLDSELSNE FVYIDSVLDG WLYPPQWMNN 180 GGDGDNENLS GQKNVISNDF ESLQW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-18 | 32 | 99 | 5 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023743105.1 | 4e-99 | dehydration-responsive element-binding protein 3-like | ||||
Swissprot | Q9LYD3 | 2e-57 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A2U1KT45 | 1e-146 | A0A2U1KT45_ARTAN; Uncharacterized protein | ||||
STRING | XP_004291182.1 | 3e-68 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 6e-52 | ERF family protein |
Publications ? help Back to Top | |||
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