PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan003874 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 226aa MW: 25966.9 Da PI: 9.0838 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.3 | 3.4e-12 | 101 | 144 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 + +GV++ k + +W A I++ +k+++lg+ g+ eeAa+++++a+ Aan003874 101 CVMRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 144 568***96.5.7*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.7E-6 | 101 | 145 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.73E-8 | 103 | 147 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-4 | 104 | 159 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-6 | 104 | 148 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MVSIRRQRLI KIYGRSPSLD LLPNEDGHAP SWLQNTRQVS IFPTPFIGVD QSPEAEKTNS 60 KEPESSNFNE SGSPTEQPTQ HPVLKRRKRH RRKHFENQEP CVMRGVYYKN MKWQAAIKVD 120 KKQIHLGTVG SQEEAARLYD RAAFMCGREP NFELTSEEKD ELSKLSWDDF LTMTRSAINN 180 KKHQRRVSSR MKFEHVENNS DQKTEANQGG NSFSGSDDAE TSALND |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023755070.1 | 1e-114 | ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
Refseq | XP_023755071.1 | 1e-114 | ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
Refseq | XP_023755072.1 | 1e-114 | ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
TrEMBL | A0A2U1KPK5 | 1e-156 | A0A2U1KPK5_ARTAN; AP2-like ethylene-responsive transcription factor | ||||
STRING | XP_010242670.1 | 4e-67 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 8e-47 | ERF family protein |