PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK33032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | NAC | ||||||||
Protein Properties | Length: 211aa MW: 24598.6 Da PI: 4.3796 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.7 | 2.4e-19 | 8 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 lp GfrF+Ptd e+ +++L+kk+ g+++++ ++ +e+ di++ +P+ Lp e++wy+++++ ++ t +n + +W + ++vl+k + KFK33032.1 8 LPIGFRFRPTDYEMSHYFLTKKALGQTMKARTIPEECpDIFSRHPRALPGY--PLEEHWYYYCRKVDNQDT---TNS---HNIWILISEGTNVLDKsnN 98 699***************************77777779***********43..35789*****99886654...333...357**99999999998888 PP NAM 97 gelvglkktLvfy...............kgrapkgektdWvmheyrl 128 g++vg+k+++ + +++++++ k +W+m+e++l KFK33032.1 99 GQVVGIKRSFKLAeheqekeesydillsDEEEEETPKYNWFMDEFSL 145 999********9966666665555555447888888*********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-26 | 6 | 162 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.772 | 8 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-11 | 9 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MEPIHRRLPI GFRFRPTDYE MSHYFLTKKA LGQTMKARTI PEECPDIFSR HPRALPGYPL 60 EEHWYYYCRK VDNQDTTNSH NIWILISEGT NVLDKSNNGQ VVGIKRSFKL AEHEQEKEES 120 YDILLSDEEE EETPKYNWFM DEFSLPLTIA DTDLVLCHVF RKKIKPEIVD LPIIESDSEE 180 EEEEEESVVA ESLNLVEEKD GSVLPPSPSP P |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK33032.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_191211.1 | 9e-82 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | ||||
Refseq | XP_006405394.1 | 5e-81 | NAC domain-containing protein 104 | ||||
TrEMBL | A0A087GT30 | 1e-153 | A0A087GT30_ARAAL; Uncharacterized protein | ||||
STRING | A0A087GT30 | 1e-154 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8604 | 17 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56520.1 | 1e-82 | NAC family protein |