PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK28195.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family EIL
Protein Properties Length: 425aa    MW: 48574.2 Da    PI: 4.5579
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK28195.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3419.82.9e-128131649353
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHH CS
        EIN3  49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtl 144
                 m+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv+g+sdsLr+WWke+v+fd+++p+a+s+y   +a++li+++e+ +   ++s+ h+l+elqDTtl
  KFK28195.1   1 MARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNAVSDYltlAAAQLISASENLD---PNSYIHMLHELQDTTL 96 
                 89****************************************************************99999998866555...9*************** PP

                 HHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHH CS
        EIN3 145 gSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsake 242
                 gSLLsalmqhc ppqrrfplekg++pPWWPtG+elwwge+g ++ ++g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake
  KFK28195.1  97 GSLLSALMQHCVPPQRRFPLEKGLAPPWWPTGTELWWGEQGaAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLEQVRRLARQSKCLQDKMMAKE 195
                 *****************************************9999999*************************************************** PP

                 HHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXXXXXXX...XXXXXX.XXXXXXXXXX...........XXXXXXXXXXXXXXXXXXXXX... CS
        EIN3 243 sfallsvlnqeekecatvsahss.slrkqspkvtlsceqkedve...gkkeskikhvqavktta...........gfpvvrkrkkkpsesakvsskevs 326
                 ++++++vlnqee+++++++ +   + ++q+++ ++s +q+ d     +++e++ k  +  ++++           ++++ +krk +++e++++ s+  +
  KFK28195.1 196 TDTWSRVLNQEEALLKRLKISDDeEEEDQERARFVSLDQE-DCFlvaQDQEQR-K-GKRIDQESslnayilvdqdQEQFGNKRKGEFMEQEAMLSN--V 289
                 ******************9994423333554555555544.332333222222.1.1222221234456677777*******************99..7 PP

                 ...XXXXXXX.XXXXXXXXXXXXXXXX CS
        EIN3 327 rtcqssqfrgsetelifadknsisqne 353
                 +tcq+s++++s+++l+f dkn ++ +e
  KFK28195.1 290 YTCQNSSCPSSDVSLGFVDKNLRTGHE 316
                 ************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.2E-1131207No hitNo description
Gene3DG3DSA:1.10.3180.103.1E-6883214IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.72E-5985210IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MARSQDSVLK YMMKIMEVCK AQGFVYGIVP EKGKPVTGSS DSLRRWWKEN VQFDQTAPNA  60
VSDYLTLAAA QLISASENLD PNSYIHMLHE LQDTTLGSLL SALMQHCVPP QRRFPLEKGL  120
APPWWPTGTE LWWGEQGAAA FEHGPPPYRK PHDLRKAWKV SVLAAVIKHM SPNLEQVRRL  180
ARQSKCLQDK MMAKETDTWS RVLNQEEALL KRLKISDDEE EEDQERARFV SLDQEDCFLV  240
AQDQEQRKGK RIDQESSLNA YILVDQDQEQ FGNKRKGEFM EQEAMLSNVY TCQNSSCPSS  300
DVSLGFVDKN LRTGHEIKCL YGTQGSVGSD GFVQSMTTSD DDYGASSKAV DAREYHSQDG  360
NWLDYLWFER LHDLNCSVQG FEDQTTAMDL NQLPDHSESN QTMNEEDFSL WDMGYEDKDI  420
YMSQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-58832131130Protein ETHYLENE INSENSITIVE 3
4zds_B6e-58832131130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK28195.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002866649.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ50.0EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A087GE930.0A0A087GE93_ARAAL; Uncharacterized protein
STRINGA0A087GE930.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.10.0EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]