PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | maker-scaffold02057-snap-gene-0.32-mRNA-1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family | EIL | ||||||||
Protein Properties | Length: 75aa MW: 8341.81 Da PI: 9.5555 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 122.1 | 9.6e-38 | 1 | 73 | 49 | 121 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqakn 116 ms aQDgiLkYMlk +evc+a+ fvYgiip+kgk+v+gas+++raWWkekv+fd+ng aai+ky+a++ maker-scaffold02057-snap-gene-0.32-mRNA-1 1 MSSAQDGILKYMLKLLEVCKAREFVYGIIPKKGKLVSGASNNIRAWWKEKVKFDKNGLAAIAKYEADC 68 899***************************************************************** PP XXXXX CS EIN3 117 lilsg 121 l++s+ maker-scaffold02057-snap-gene-0.32-mRNA-1 69 LAMSE 73 *9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.0E-36 | 1 | 73 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
MSSAQDGILK YMLKLLEVCK AREFVYGIIP KKGKLVSGAS NNIRAWWKEK VKFDKNGLAA 60 IAKYEADCLA MSEDG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AJ298994 | 2e-81 | AJ298994.1 Fagus sylvatica mRNA for EIN3/EIL-like transcription regulator (einl1 gene), clone FsEINL1. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018810449.1 | 1e-39 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_018810450.1 | 1e-39 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-35 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2I4DTH9 | 3e-38 | A0A2I4DTH9_JUGRE; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | XP_009374861.1 | 3e-37 | (Pyrus x bretschneideri) | ||||
STRING | XP_006494725.1 | 3e-37 | (Citrus sinensis) | ||||
STRING | EMJ09505 | 3e-37 | (Prunus persica) | ||||
STRING | GLYMA15G03650.1 | 3e-37 | (Glycine max) | ||||
STRING | AES67727 | 3e-37 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 6e-38 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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