PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00657_0020
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family AP2
Protein Properties Length: 955aa    MW: 103245 Da    PI: 6.04
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00657_0020genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-12576635155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV+ + ++gr++A+++d s+++    k+ ++++lg +  + +Aa+a++ a++k++g
  kfl00657_0020 576 SQYRGVTKHCSTGRYEAHLWDNSSRKeginKKgRQVYLGGYEKETDAARAYDLAALKYWG 635
                    78*******************777555687557**********99************987 PP
2AP251.42.7e-16678729155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV+++++ grW+A+I  +     +k+ +lg++ t eeAa+a++ a+ k++g
  kfl00657_0020 678 SKYRGVTRHHQHGRWEARIGRVLG---NKYLYLGTYPTQEEAAQAYDIAAVKYRG 729
                    89****************988422...5*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-8576635IPR001471AP2/ERF domain
CDDcd000182.72E-15576643No hitNo description
SuperFamilySSF541715.23E-13576644IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.6E-12577644IPR001471AP2/ERF domain
PROSITE profilePS5103216.463577643IPR001471AP2/ERF domain
SMARTSM003809.5E-23577649IPR001471AP2/ERF domain
PfamPF008472.3E-11678729IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-17678739IPR016177DNA-binding domain
CDDcd000181.94E-22678739No hitNo description
PROSITE profilePS5103218.979679737IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-17679738IPR001471AP2/ERF domain
SMARTSM003801.3E-30679743IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0040019Biological Processpositive regulation of embryonic development
GO:0048364Biological Processroot development
GO:0060772Biological Processleaf phyllotactic patterning
GO:0060774Biological Processauxin mediated signaling pathway involved in phyllotactic patterning
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 955 aa     Download sequence    Send to blast
MDADLFLLLD SSAQDSFEFL NATKELIPKG QAISALEESA LSGPARSSIS VEVQGQEPER  60
LTRRAQDHSQ AANLEASVSL LCHEGNTEIL YSNPVTISRR ESIDESSGEG MEAAQGGSPA  120
SQEMKQNSTA EGEPGACTIL QAETINESRT ENLTTTLETT GTPEDGQAVR ASARGEHLTP  180
LSEAFRTVDT GRPNGLLCVA KRTQLPTLLD NSPPQQPASE DGQAPKRLGF AEKKFGRDFE  240
SFIGEERATG TLGENPDLRA GSLDQAEDRG PVERSLGGVR GFKKGLRTAF LSRDRARDAD  300
GFFSARRLPR AARAGDPVST QAGVQSDQRS EALPGQPLSN GLKKFDGVFP EGSPAEAPGP  360
FDRELLTSLG IGKDSLERAA GSSPTAVLSP RALVAQPPDS LSLAHLSPPL QAYQGNTNFP  420
NHYHSPSNVP AFAHSPSALD FLNSMQLPPF EPSRAPPSLS QFLQRPEVTR SEDSFGAEPA  480
EEAAPGISGF KSMLRKKQQV RPGKSTEPNA LPVILEGKPV ELNRRVSASP KSPMDLVESD  540
DPVGGAEDVN GRRKQPGRGV KRPAANSPSA VGKRSSQYRG VTKHCSTGRY EAHLWDNSSR  600
KEGINKKGRQ VYLGGYEKET DAARAYDLAA LKYWGVGTNY NFPLKDYEQD LKEMEDVSRQ  660
EFVATLRRKS SGFSRGASKY RGVTRHHQHG RWEARIGRVL GNKYLYLGTY PTQEEAAQAY  720
DIAAVKYRGV HAVTNFDLSR YLEFMRPGGS QTLPAPPSAD SEGGTGAEEG SDLTYGSPRK  780
RKRAGSERPA ARSFEPRVLS TQIVMPSPAP RFPEPASPTE PASPYQVDPR IDPRYAPLSV  840
DDQQALSDQF YFGGEFSPTL DQPFSPLNTT HAVHLPNPLQ YCQLVPYPNL SLNFPQALSQ  900
LFPVYPGLGQ YPQTLPGAYA PGLQVGSDNR EGAEDAVHAS NGLVPPGYSA WDAAQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IPL60.0A0A1Y1IPL6_KLENI; AP2 domain containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP11217209
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.14e-86AINTEGUMENTA-like 5