PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04778.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 262aa    MW: 28509.5 Da    PI: 10.2443
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04778.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.81.2e-09242262121
                                   ---SS-EEEEEEE--TT-SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                                   ldDgy+WrKYG+K vk+s++p
  Zpz_sc04778.1.g00010.1.am.mk 242 LDDGYRWRKYGKKAVKNSPNP 262
                                   59*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-10229262IPR003657WRKY domain
SuperFamilySSF1182902.09E-7235262IPR003657WRKY domain
PROSITE profilePS5081113.035237262IPR003657WRKY domain
PfamPF031062.0E-5243262IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MFPCCRLVSG DRALQQHCYD FDRLPTGPRR QQINEAARVA MPPRAPAKKL RRHQIESEAR  60
CETRGARALI KTATRRTVGC RMHVALVQAR ATAAACLSCR PHAMEYRHPY SSGSASASAN  120
YGDASPAADF RPAAFGADRP AVRPAPLDVF DYLSDEGAHP APAAVPAVPT FGSPPPPPPR  180
SMPAVQVVPD AAGYGHAARP RGFMYLNIFF PRGAASVAVA AEEPTTMTDR IAFRMRSDKE  240
VLDDGYRWRK YGKKAVKNSP NP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04778.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.15e-12WRKY DNA-binding protein 50