PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03534.1.g00070.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 153aa    MW: 16268.2 Da    PI: 7.2652
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03534.1.g00070.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.8e-1389134549
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvke.LeaeNkaLkkel 49 
                                     ++++r++kNRe+A rsR+RK+a+++eLe++v   L+ e+ aL+ + 
  Zpz_sc03534.1.g00070.1.sm.mkhc  89 RKTIRMMKNRESALRSRARKRAYVQELEKEVRRlLKVEMAALIRTS 134
                                     789****************************862577888888665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-1184124No hitNo description
SMARTSM003382.7E-785150IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.16387122IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-989124No hitNo description
PfamPF001701.7E-1089144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MSSSPQLSLS GCSSLFSLSS SSSGRDNDSA AAAPAMPPLP PRQPMLSLSV GGGGGDDVEE  60
EEGEEYRLGG LDLQLMGGGG SSCDGDDERK TIRMMKNRES ALRSRARKRA YVQELEKEVR  120
RLLKVEMAAL IRTSGSSSSK SAHIRRTSSS TEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03534.1.g00070.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961973.15e-33protein FD
TrEMBLA0A2T7FEE23e-37A0A2T7FEE2_9POAL; Uncharacterized protein
STRINGPavir.J00689.1.p8e-34(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.34e-08abscisic acid responsive elements-binding factor 3