PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc03373.1.g00040.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 246aa MW: 26161.5 Da PI: 5.5018

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc03373.1.g00040.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.9e-13	167	220	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkeva 57 +r +r++kNRe+A rsR RK+a+++eLe v +Le+e +L ++++e+ +k + Zpz_sc03373.1.g00040.1.sm.mkhc 167 QRRKRMIKNRESAARSRDRKQAYVAELESQVSQLEEEQAELlREQVEQNQKRLK 220 799**********************************98751444554444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.8E-9	163	225	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.588	165	210	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.6E-11	166	225	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.8E-13	166	224	No hit	No description
SuperFamily	SSF57959	1.94E-10	167	212	No hit	No description
CDD	cd14707	1.48E-17	167	222	No hit	No description
PROSITE pattern	PS00036	0	170	185	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MAPSRVASSQ PQATGSSELA HFPSGSGIGS MTMDDIIRNI YGDEPPPSAA NAGEPVQPVP 60 AAAQDAAAVR RTSEEVWKEI SAAGGLSVPA PPLPPPPAAV VSVAGAGGAA SEMTLEDFLA 120 RDAGAARAPA MDGTIALGFP DGDVVGVGGG RAQKRAPMDA IDRAVVQRRK RMIKNRESAA 180 RSRDRKQAYV AELESQVSQL EEEQAELLRE QVEQNQKRLK ELLEKAVPVI RRRPLQDLRR 240 TNSMEW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00648	PBM	Transfer from LOC_Os05g36160	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc03373.1.g00040.1.sm.mkhc

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004961953.1	1e-84	G-box-binding factor 4
Swissprot	Q0JHF1	8e-57	BZP12_ORYSJ; bZIP transcription factor 12
TrEMBL	A0A368QHW4	3e-83	A0A368QHW4_SETIT; Uncharacterized protein
STRING	GRMZM2G132868_P01	5e-83	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03970.1	5e-14	G-box binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]