PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc03185.1.g00040.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 1392aa MW: 148837 Da PI: 10.4426

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc03185.1.g00040.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.6e-07	647	678	4	36
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRt 36 W t E++ll+ a k++G+g+W++++ +m+ R+ Zpz_sc03185.1.g00040.1.am.mk 647 WDTREELLLASALKRHGTGSWDSVSMEMQ-SRC 678 99***************************.998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00717	0.0034	643	701	IPR001005	SANT/Myb domain
CDD	cd00167	1.56E-4	647	698	No hit	No description
Pfam	PF00249	6.4E-6	647	679	IPR001005	SANT/Myb domain
SMART	SM00297	2.8E-5	775	1164	IPR001487	Bromodomain
Pfam	PF00439	1.3E-9	1088	1148	IPR001487	Bromodomain
SuperFamily	SSF47370	8.37E-13	1089	1161	IPR001487	Bromodomain
Gene3D	G3DSA:1.20.920.10	7.1E-12	1090	1186	IPR001487	Bromodomain
PROSITE profile	PS50014	10.774	1090	1145	IPR001487	Bromodomain
CDD	cd04369	2.72E-12	1090	1159	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:1904659	Biological Process	glucose transmembrane transport
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1392 aa Download sequence Send to blast
MLVRSLARPL TFPVKLLSPG RPSDAYVGGA WPACYELSVR RFRPPSCRLL PASLLLCKVN 60 DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DGRTTATVQP VAPRTRPISS LERPSGQAEW 120 VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKVPIGVLGL 180 PFQSGLSAGG DPRELRFDLS TTFSSGPALR LSYRPNDPGL PFALTVRAGV GPLGSPGRAP 240 FVIAAEFNLL SSDPSSPAFF LRLKPRLGDF SLGHTIRSSA VPAPAPRTIV EASDGDGEGH 300 EVNYKAFSFS GSGIAAAGRS GGLGLGALLS GMRLTTRSVL PLWGRASLRF NWGLRVPPEL 360 QPGALADGHS KGARAPVSKM PLLVMSKISI EQSPRSDGVR KCARADASVA ATADGSDGSG 420 HGGGEEVAFS LVRRQLEELN VENVMLRRAV EDLRAEIRSS MDASPAAPRV DARRSPPPPQ 480 PQSHSFQAKP DRRGNGKEPA AETAKKASAV AVDDVGEELK KALEARRRSP RHEPFHGVLP 540 RRNQRETPDV DNDKKKPVRL HVHVSLRETD REHAVMYLNS VLHAVAVKPE SMKLYVKDRR 600 RYESPRPLKT RRRSGRAEES GMTPRSDDPD VAPGPVPVSA AAGGEIWDTR EELLLASALK 660 RHGTGSWDSV SMEMQSRCVS AADARFTPSG CRQRALLLHR RFAAGGGGDD DGDPDAAAAA 720 DALVEKLRKL RCDELRREVE QHDLLIGAAP GDPSDAYRSV AVFSLVEMLT RRVFIIRMIR 780 SLQSKVKRLE EERERSNSGK RTPAVKEEAE DEEAVHATGS PKDDDLAGAD RVSGGESGRS 840 CKESNSTDLK PRPGNDAGTA SPSAAGDGDA EAREEEAAGG ESVSVKREET SGESVAGSKE 900 ADATKENSDE QSWASPSRQA SWLTERHGEG GKDAEEALPS TSAPAALPAL EAEALSVFLE 960 SVRTSKPGSV FERRLESQRR TRSRTARTVA SGGIELVRHV HVPVTCLIGA VRSWHGMLGA 1020 GPSDERGEVE IRAQVGGAGE GAFRAHAWPA KGQIISGHVG VRNLLGPSCR PTCSKQRSTC 1080 SAYCELDDAN YRSTIRRHVD LETIRSKLEV GGSGPRYSSA SEFYRDLLLL CTNALVFFPR 1140 DSPEHAAAVQ TRALVSKHMS ASLRKDQPGT SGKAAAAPSA ASKKPKADAD VGSLLEKTAP 1200 IIVCRKRSSI TKAAAAKAEK VKEETEEDQE DDAKKMVATK EKTRGLRTTK TRGGLTRKTA 1260 PRQKAGKDSE SESVAAEGTK KSDKKGGRGA ATGGVAKKRN AVDFLNRMKQ NSGPSTERVS 1320 LLETLKLSAA AEEEKKPGKG EARKASGSGS KRGGKATPPG RRMGRPPKRA AAPPSPPPSK 1380 RARGSGKRGG KK

Sequence ? help Back to Top

Protein Sequence Length: 1392 aa Download sequence Send to blast

MLVRSLARPL TFPVKLLSPG RPSDAYVGGA WPACYELSVR RFRPPSCRLL PASLLLCKVN  60
DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DGRTTATVQP VAPRTRPISS LERPSGQAEW  120
VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKVPIGVLGL  180
PFQSGLSAGG DPRELRFDLS TTFSSGPALR LSYRPNDPGL PFALTVRAGV GPLGSPGRAP  240
FVIAAEFNLL SSDPSSPAFF LRLKPRLGDF SLGHTIRSSA VPAPAPRTIV EASDGDGEGH  300
EVNYKAFSFS GSGIAAAGRS GGLGLGALLS GMRLTTRSVL PLWGRASLRF NWGLRVPPEL  360
QPGALADGHS KGARAPVSKM PLLVMSKISI EQSPRSDGVR KCARADASVA ATADGSDGSG  420
HGGGEEVAFS LVRRQLEELN VENVMLRRAV EDLRAEIRSS MDASPAAPRV DARRSPPPPQ  480
PQSHSFQAKP DRRGNGKEPA AETAKKASAV AVDDVGEELK KALEARRRSP RHEPFHGVLP  540
RRNQRETPDV DNDKKKPVRL HVHVSLRETD REHAVMYLNS VLHAVAVKPE SMKLYVKDRR  600
RYESPRPLKT RRRSGRAEES GMTPRSDDPD VAPGPVPVSA AAGGEIWDTR EELLLASALK  660
RHGTGSWDSV SMEMQSRCVS AADARFTPSG CRQRALLLHR RFAAGGGGDD DGDPDAAAAA  720
DALVEKLRKL RCDELRREVE QHDLLIGAAP GDPSDAYRSV AVFSLVEMLT RRVFIIRMIR  780
SLQSKVKRLE EERERSNSGK RTPAVKEEAE DEEAVHATGS PKDDDLAGAD RVSGGESGRS  840
CKESNSTDLK PRPGNDAGTA SPSAAGDGDA EAREEEAAGG ESVSVKREET SGESVAGSKE  900
ADATKENSDE QSWASPSRQA SWLTERHGEG GKDAEEALPS TSAPAALPAL EAEALSVFLE  960
SVRTSKPGSV FERRLESQRR TRSRTARTVA SGGIELVRHV HVPVTCLIGA VRSWHGMLGA  1020
GPSDERGEVE IRAQVGGAGE GAFRAHAWPA KGQIISGHVG VRNLLGPSCR PTCSKQRSTC  1080
SAYCELDDAN YRSTIRRHVD LETIRSKLEV GGSGPRYSSA SEFYRDLLLL CTNALVFFPR  1140
DSPEHAAAVQ TRALVSKHMS ASLRKDQPGT SGKAAAAPSA ASKKPKADAD VGSLLEKTAP  1200
IIVCRKRSSI TKAAAAKAEK VKEETEEDQE DDAKKMVATK EKTRGLRTTK TRGGLTRKTA  1260
PRQKAGKDSE SESVAAEGTK KSDKKGGRGA ATGGVAKKRN AVDFLNRMKQ NSGPSTERVS  1320
LLETLKLSAA AEEEKKPGKG EARKASGSGS KRGGKATPPG RRMGRPPKRA AAPPSPPPSK  1380
RARGSGKRGG KK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1333	1339	EKKPGKG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc03185.1.g00040.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4217	3	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	7e-17	DNA-binding bromodomain-containing protein