PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01074.1.g00060.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 339aa    MW: 36359.2 Da    PI: 7.5884
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01074.1.g00060.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.21.2e-30218273156
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                     k+r++W+p LH++Fv a++qLGG+++AtPk+i+e+m+v+gLt+++vkSHLQkYRl+
  Zpz_sc01074.1.g00060.1.sm.mkhc 218 KARRCWSPVLHRQFVAALHQLGGPQVATPKQIREVMQVDGLTNDEVKSHLQKYRLH 273
                                     68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.34215275IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-27216276IPR009057Homeodomain-like
SuperFamilySSF466893.05E-15216276IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-24218273IPR006447Myb domain, plants
PfamPF002492.4E-6220271IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MGLDVGEIGV GLDLGLDLRL FAARSAGRMA AAAKGGPAAV DACIKSLEEE RKKIEMFRRE  60
LPLCARLLAD VIEELKEDAV KRSGDVASKA DDCDKRKWMS TAQLWVDSEA KSQESEKEQQ  120
SEITSPEPRL LGGAPMPLRA VAAPPPPPQF RTEGTVRQPG LAVLSPVVRR PLSPVPAGDE  180
HLQNQNVAAR FAATVPPSTP ALGLHAQTQQ QQQQQARKAR RCWSPVLHRQ FVAALHQLGG  240
PQVATPKQIR EVMQVDGLTN DEVKSHLQKY RLHTRRSPDA ASVTQQIVLV GGLWVPKEQG  300
SSQSGSPQGP LQFSDSGSGV AASVATVGGD HSSSDEDVV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01074.1.g00060.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025792667.11e-123transcription factor HHO5-like
TrEMBLA0A059Q2Z51e-134A0A059Q2Z5_9POAL; DNA binding protein
STRINGSi036412m1e-122(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.13e-34G2-like family protein