PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00429.1.g00250.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 363aa    MW: 39285.3 Da    PI: 4.9076
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00429.1.g00250.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY672.8e-21116180358
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT......EEEEEEES--SS CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk......vveitYegeHnh 58 
                                   Dgy+WrKYGqK+++g+ +prsYYrCt +   gCp+k+ v+r+++ +         +++Y  eH++
  Zpz_sc00429.1.g00250.1.am.mk 116 DGYQWRKYGQKHIEGAMYPRSYYRCTRSaeqGCPAKRTVQRNDDAGGpvtsspKYTVVYMVEHTC 180
                                   9*************************988889*********996543111111345666666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-2299181IPR003657WRKY domain
SuperFamilySSF1182903.53E-20108181IPR003657WRKY domain
SMARTSM007741.2E-27114182IPR003657WRKY domain
PfamPF031062.4E-23116180IPR003657WRKY domain
PROSITE profilePS5081118.647116157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MTTLGRELEL VAQLRELLSP NRSNGAWPSS TETGKLMLDD ELSVKVESGG LPPDASRDST  60
RAAEAACSGR RRRHGTKRAR NKDEQVETQQ PPGTCSKRRK KQQQSTWLVT SVPDFDGYQW  120
RKYGQKHIEG AMYPRSYYRC TRSAEQGCPA KRTVQRNDDA GGPVTSSPKY TVVYMVEHTC  180
AANDDGSMLE APPVILETTA VVPPATKNIA GTFLPDQADD QARRHEVGAA AVVDSAAEVG  240
SSGSPAPAVS VTTTTTTTTG AHTESPASSV DDATWSGMAN NNNSNDVVDN LLYDDGLFAL  300
DDRWAEMSSA LVHDQDMDDF ITGPIRSPVH VAAGSCWTVD QQYLLQLVND EPVSHFSAAG  360
FTF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-131161801068OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00429.1.g00250.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977390.11e-65probable WRKY transcription factor 58
TrEMBLA0A0A9HC423e-90A0A0A9HC42_ARUDO; Uncharacterized protein
STRINGPavir.Ca00085.1.p3e-64(Panicum virgatum)
STRINGSi010813m4e-65(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-16WRKY DNA-binding protein 70