PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma84g00420.1 | ||||||||
Common Name | ZOSMA_84G00420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | WRKY | ||||||||
Protein Properties | Length: 313aa MW: 33719.3 Da PI: 5.2322 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2.1e-30 | 89 | 147 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY eHnh Zosma84g00420.1 89 SDSWTWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTMLIVTYAAEHNHA 147 69*************************998****************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 31.858 | 83 | 149 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.3E-31 | 86 | 149 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-26 | 87 | 149 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.1E-36 | 88 | 148 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.4E-26 | 90 | 146 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence Send to blast |
MGGRSRFERL GSTSTSSGEG GEDFPMTTTF IKKHQSQTLI PSNNSTASSS SPAKKSAGRR 60 SVKKRVVSVP IVEIDGSRPK GGGEGAPPSD SWTWRKYGQK PIKGSPYPRG YYRCSSSKGC 120 PARKQVERSR LDPTMLIVTY AAEHNHAWPL PKNRNHHNHN YQSEPPPLLP PVTAQLPASQ 180 DTEEEVEVEE ELNGSLPQSP NPAATTTTTN TSTCSVDDTN NTPTFAPDLG QDDSPLMMIE 240 EDLGWRPYMS ATSLQSDVAM MMPVSYDDVR KDLSIGDGGG GDEDEDGSLF AGLGELPECS 300 VVFRRGFPVG AV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-20 | 64 | 146 | 6 | 76 | Disease resistance protein RRS1 |
5w3x_D | 2e-20 | 64 | 146 | 6 | 76 | Disease resistance protein RRS1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NLH3 | 0.0 | A0A0K9NLH3_ZOSMR; WRKY transcription factor 5 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7088 | 36 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 4e-41 | WRKY DNA-binding protein 65 |
Link Out ? help Back to Top | |
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Phytozome | Zosma84g00420.1 |