PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma317g00020.1 | ||||||||
Common Name | ZOSMA_317G00020 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | WRKY | ||||||||
Protein Properties | Length: 234aa MW: 26726 Da PI: 6.3948 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.3 | 2.1e-25 | 112 | 171 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYGqK++ g+++p++Y+rCt++ +C ++k+v+ s+ d +v++itY geH + Zosma317g00020.1 112 EDGYHWRKYGQKDILGTKHPKGYFRCTYSqsrQCLATKHVQMSDGDRTVFDITYFGEHSC 171 8**************************998899*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 20.243 | 106 | 170 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.9E-24 | 108 | 171 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.54E-23 | 110 | 171 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.9E-34 | 111 | 173 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.0E-23 | 112 | 171 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MENNLIAEIN NSRAFVKKLQ LLLDQQDLHC LDISSIKSLV NSLTTSIENT MTCTQFAIFQ 60 GEQIKQEESP SSVNDTPRVQ RSKKRIRRSK EKFNRHVKVT VNLAKGLAES LEDGYHWRKY 120 GQKDILGTKH PKGYFRCTYS QSRQCLATKH VQMSDGDRTV FDITYFGEHS CFPGESKNKE 180 TVPPDHDVIT ENASLSFLDT SVLSLPDMSE LFCQDYLTLE NEFSFDDANY YLS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 4e-18 | 107 | 171 | 4 | 68 | OsWRKY45 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9P9D0 | 1e-175 | A0A0K9P9D0_ZOSMR; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1086 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 2e-25 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma317g00020.1 |