PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00123.1.g00380.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 408aa    MW: 43506.5 Da    PI: 8.4133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00123.1.g00380.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.15.5e-26224283258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDg++WrKYGqK++ g+++pr+Y+rCt++   gCp++k+v+r+++dp v++++Y+geH+ 
  Zjn_sc00123.1.g00380.1.am.mk 224 DDGHSWRKYGQKDILGARHPRAYHRCTYRssqGCPATKQVQRTDSDPAVIDVVYHGEHTR 283
                                   8**************************998889*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-25212283IPR003657WRKY domain
PROSITE profilePS5081122.641218286IPR003657WRKY domain
SuperFamilySSF1182903.4E-23221283IPR003657WRKY domain
SMARTSM007741.3E-34223285IPR003657WRKY domain
PfamPF031067.2E-24224282IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MLLSSGKHVF VYSSDAQTGL KIGLVCPRTP VDGQASTGGE SRWAERLAKT VERDQDSAQC  60
YGAGPNPARY GAAIQQAASS ALRPPHLTTT TSSFLPSSSS SRSNSSSSPT TPGIEPSTTS  120
LAAMDGASVQ QQQLGAELCH VQDLLRDLDL HLHSPSSYSV DQCRRLVAEI VALTDRSIGM  180
AAAAVLRCAQ SAQRRRLRPR KATARWSGQV RVSCAAGAAK GPADDGHSWR KYGQKDILGA  240
RHPRAYHRCT YRSSQGCPAT KQVQRTDSDP AVIDVVYHGE HTRRSAVSGA RKTPQHNAHA  300
EGLVARLTVA TTDAAVPPMT PESCPPLGAP SPWSLASPVG SDSNTVYPCP VNWPLDGNLQ  360
EVVSAFAVRS GGAHQTALDT EFMRPEYLGN FDYQSFDIGA LETTQSLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-18224284969OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194200RRLRPRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820899.18e-77probable WRKY transcription factor 41
TrEMBLA0A1E5V0M89e-78A0A1E5V0M8_9POAL; Putative WRKY transcription factor 41
TrEMBLA0A368RL201e-77A0A368RL20_SETIT; Uncharacterized protein
STRINGPavir.Fa01520.1.p8e-80(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-23WRKY family protein