PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00092.1.g00100.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 24813.6 Da PI: 4.9822 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.6 | 1.3e-11 | 13 | 105 | 34 | 127 |
NAM 34 ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykg 111 +++ +++Pw+L + ++ ++ fF rd++ ++ +r++r g+Wk + d++vl +++ ++++ L + Zjn_sc00092.1.g00100.1.sm.mk 13 VEDNTAANTQPWKLLRnhGLSDDDVPAAFFYVRDESRPNARRSHRCDGGGTWKIQKCDRHVLLVgGENIRWTRNNLNLNMD 93 455578899*****74123333444568888899999************************9994555688999***9843 PP NAM 112 rapkgektdWvmheyr 127 + + Wvmhey Zjn_sc00092.1.g00100.1.sm.mk 94 SG----SIGWVMHEYF 105 33....578******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 13.547 | 1 | 123 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.48E-14 | 13 | 112 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-5 | 23 | 104 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MALAFGGRLG VIVEDNTAAN TQPWKLLRNH GLSDDDVPAA FFYVRDESRP NARRSHRCDG 60 GGTWKIQKCD RHVLLVGGEN IRWTRNNLNL NMDSGSIGWV MHEYFIDDRP SLKVCLICFS 120 GYGKKRARHP DDSCLADEPK SQRLRVAAGS DGGSADCTTT TLIDQNLSTA YALEDSSAGL 180 DLENIFSDGE LQKLKDSFDA AESFLLSDDN EEQPPARMVK QKSD |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 3e-07 | NAC domain containing protein 45 |