PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00067.1.g00100.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 178aa    MW: 19209.8 Da    PI: 5.2622
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00067.1.g00100.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.92e-082985358
                                  -SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE.....EEEEEES--SS CS
                          WRKY  3 Dgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv.....veitYegeHnh 58
                                  Dgy+ WrKYG  +++g+ +p      + +gCp+k+ v+r+++  ++      +++Y   H++
  Zjn_sc00067.1.g00100.1.am.mk 29 DGYQyWRKYGENQIEGAMYPS-----AEQGCPAKRTVQRNDDGDDIggspkYTVVYMAVHTC 85
                                  88876************9996.....589***********9654432222267888888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.3E-102086IPR003657WRKY domain
PROSITE profilePS508118.6392363IPR003657WRKY domain
SMARTSM007748.1E-82787IPR003657WRKY domain
SuperFamilySSF1182901.31E-92786IPR003657WRKY domain
PfamPF031062.6E-112985IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MNAFDEARSC RKTKHGISAC LVTSVPDFDG YQYWRKYGEN QIEGAMYPSA EQGCPAKRTV  60
QRNDDGDDIG GSPKYTVVYM AVHTCTANDS MEKPVILETT AVQAAYKKPC GAKNIATPAA  120
FLPPPAVESA AAAESSIPIL HAVLKIEPDV SLASGEMKYE QFIGCKGCLL FNFEVFGA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977390.16e-37probable WRKY transcription factor 58
TrEMBLA0A0A9HC422e-39A0A0A9HC42_ARUDO; Uncharacterized protein
STRINGSi010813m2e-36(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.17e-08WRKY DNA-binding protein 54