PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00050.1.g00470.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 651aa MW: 69284.6 Da PI: 11.3297 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 55.1 | 1.6e-17 | 582 | 634 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+ Zjn_sc00050.1.g00470.1.am.mk 582 SDRRKKRMIKNRESAARSRARKQAYVRELEREVKLLQQENQSLRVKYEQLRVS 634 689******************************************99999865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.3E-13 | 580 | 645 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.013 | 582 | 632 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.8E-16 | 583 | 634 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.02E-18 | 584 | 631 | No hit | No description |
SuperFamily | SSF57959 | 1.0E-11 | 584 | 633 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.2E-15 | 584 | 635 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 587 | 602 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 651 aa Download sequence Send to blast |
MRSFSIWEKT CTDAIDLPST NPIDQEVLVA PVAAGQESCR SHAKPTGETK TAASSAPVRA 60 GACCRGKRAQ KASESSPAPT HERAVRTVPR LAEAASLAAS HPPSPRARPR HCGRSLLLNR 120 GDAASAAART YRPLRSARHH GAALISAAPC GHARALQASV APVPVRHVTL PRARAVKREG 180 NVVRERPRRL ATSFAVPVEH LLCVLGGTRT PKSREATKLC GATAGSGPAA SYRALSQTWT 240 ALIVLDPGAT RIPRKKRGAD TANPSREIRP APCEKRRRGR RQSPAALATE PSATALPASS 300 EIDDLLANLF SEPLDRRGNS SARVGQAQIP TEKCLFVSLA CLLCPLPGDR SNGTAQQDEK 360 TRRRRNLSDP GPWVIWRTGA NLTSAESRSP VNSEASLSRA HTRSGTVRAE KDLWLGRPRA 420 TKPAGPLPLW PCGAPLRPKT SKKKGKPDRP RADAMAAMDM DDDEDIWANT SSPSASPPQP 480 AGAGFISTQL SLNSQLHLLS SAAAHGGSPP DRSGGDGVFA ADGGIRHHVV GFGGGAFRNA 540 SAAPAPSFFP YGLDAGAGRG ALEHEMCLGP AGAAWGGAVG GSDRRKKRMI KNRESAARSR 600 ARKQAYVREL EREVKLLQQE NQSLRVKYEQ LRVSVEVPVK KTLRRLPSAP F |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LC020115 | 7e-55 | LC020115.1 Sasa veitchii var. hirsuta SvFDL1 mRNA for FD-like gene, complete cds, strain: SvFLD1c. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 5e-19 | basic region/leucine zipper motif 27 |