PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00049.1.g01140.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 343aa    MW: 36333.6 Da    PI: 4.9072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00049.1.g01140.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57e-18131181155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr +k +g+++AeIr p     r +r +lg+f+taeeAa+ ++a++++++g
  Zjn_sc00049.1.g01140.1.sm.mk 131 PKFRGVRKRK-WGKFAAEIRAPQ----RrQRLWLGTFDTAEEAAREYDAYARQFRG 181
                                   79*****999.**********83....35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-12131181IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-19132190IPR016177DNA-binding domain
CDDcd000181.17E-25132188No hitNo description
PROSITE profilePS5103222.431132189IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-28132189IPR001471AP2/ERF domain
SMARTSM003806.9E-31132195IPR001471AP2/ERF domain
PRINTSPR003673.0E-9133144IPR001471AP2/ERF domain
PRINTSPR003673.0E-9155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MATIAVRKPA PKQKGIKTEL AGATTAPVVR KPAAPRQQGA KKAPEPPATV RRLVRIFCND  60
LDATDSSGDE ADTPGEVRLR QFVMEVRFDQ LARFDGMTST SATRAPNRGG GGGKTKPAAV  120
PAAAAGGEAE PKFRGVRKRK WGKFAAEIRA PQRRQRLWLG TFDTAEEAAR EYDAYARQFR  180
GPSAMTNFPA PSSPPPSPPR AAVPAAPDRV VDISSAEESS DESTRHSPVS VLRAAEAAPL  240
NPTDAADATQ QNSSSSAGQN AKGDLCPFSA DALLPQVDPD LFLFGEAAPP SLFDDEFLPK  300
LDDFLGTSSP LDLGDLPLWP DVDGGSFSDI ADDLFAGDPF PVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-16127189972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008650357.19e-65pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A3L6E9173e-66A0A3L6E917_MAIZE; Ethylene-responsive transcription factor 10
STRINGGRMZM2G328197_P013e-64(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131332332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-19cytokinin response factor 4