PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00018.1.g05160.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 798aa    MW: 84562.8 Da    PI: 8.2438
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00018.1.g05160.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.88.2e-27522583159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ++Dg++WrKYGqKe+ g+++pr+YYrCt++   gC ++k+v+r++edp+++++ Y g+H+++
  Zjn_sc00018.1.g05160.1.am.mk 522 VNDGHSWRKYGQKEILGAKYPRAYYRCTHRhsqGCAATKQVQRTDEDPELFDVFYLGTHTCR 583
                                   58***************************98999*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.161517580IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.4E-26518583IPR003657WRKY domain
SuperFamilySSF1182906.41E-24520584IPR003657WRKY domain
SMARTSM007741.2E-37522584IPR003657WRKY domain
PfamPF031061.4E-25523583IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    Send to blast
MPGCSLVRPC HIGARAGKET RAHIGDGKGV ETDDDVRRDA KSLSSRQGSI GTLPTITDEA  60
GPFSFYFPGH FAGTEKCPAE QLAEFSQIAT GAIAPSAAPR HALSQEVSKS PRPTREDYSR  120
STALQSSISI RAFDEAGLTP VNSQLIDEMS SLFRSQKGSQ VRQATLPCRS DPFDAIDAVT  180
LASSSKASIS TACMAAAYLL IVLSQDARRA SNHKIYSRPG PGRTKMPTQR MHKRAKRRTA  240
GRRFTDRASV AGLACPPSSR HVTTRRPQVP WASSSSSPCH RVSGSAPRGG RPGACECTTS  300
AATCRSCMNP EQLTQSSCDH GASLEPCNHG GTRLEVDAAA ITAAISTPAA PVHASSSNQA  360
PAVPGQGCSA VAPSPLDVCD TGAIPTPTAS GDSVTAPADA PAACDVLTTA TCPLIIYSDQ  420
AKQHQELAKQ LEEQLGGSRD LCKHLASQIF SLTERSIGII TSSDFGGARK RSAADAGLGA  480
ATPGSLGQLA DAPFKTTKKR KIMEKTKSQV RVSSAGGCET PVNDGHSWRK YGQKEILGAK  540
YPRAYYRCTH RHSQGCAATK QVQRTDEDPE LFDVFYLGTH TCRFHNTAAD EAAAATPPPE  600
HRPDARSLLH NLAVKNGEGL AVAGEPQGWD ATTPFGMPST PASLCLAPER SPFSAPSVSD  660
NYGVSPAPPE LHHAPSFPTL DAAEWRAQSE LHEVVSALVV AGTPPVPGCM DVTDELLDDI  720
DRERARMHVA ITNSTLGDRV PDKRNPDRHR PGDRQFTPLP VAGVTAWRVC GRRARVGVAT  780
RPENTASVLP HPASYMVE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-21522583869OsWRKY45
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-32WRKY DNA-binding protein 46