PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00012.1.g05220.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 389aa MW: 42324.1 Da PI: 12.0259 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.3 | 8.2e-14 | 310 | 362 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkev 56 +r++r++kNRe+A rsR RK+a+++eLe v +Le+e +L ++++e+ +k Zjn_sc00012.1.g05220.1.sm.mkhc 310 QRQKRMIKNRESAARSRDRKQAYVAELESQVSQLEEEQAELlREQVEQNQKRL 362 89***********************************9875144455544444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-13 | 300 | 367 | No hit | No description |
SMART | SM00338 | 2.2E-9 | 306 | 368 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.542 | 308 | 353 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-12 | 309 | 366 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.0E-10 | 310 | 355 | No hit | No description |
CDD | cd14707 | 3.22E-17 | 310 | 365 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 313 | 328 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence Send to blast |
MQCTAPRTDT RRKKFRFLNA LLLRAGRGPR RRHRRRRPAG TLRFEKGGHG LPIITRGSRL 60 VFPSRRHAWR RAQNTELQTA LRAALLSLSS SPTNQPSRSS RSFFFTARLG DKRSEPRDFI 120 RGKGAGRRAG DFFFPLPFPR AVQAGRRMAS SRVATSPPQA TGSSSDLARF TSGGSGIGSM 180 NMDDIIRNIY GDAPPPGAAG GPVETVAAAA APEAAAVRRT SEEVWKEISA AGGLSVPAPA 240 LPPPVVAAGG GGAAEMTLED FLARDTGAAR APAVDGTVAL GFADGYVMGN GGGRARKRAP 300 MDPTDRAVVQ RQKRMIKNRE SAARSRDRKQ AYVAELESQV SQLEEEQAEL LREQVEQNQK 360 RLKELLVKAV PAIRRKPSQD LRRTNSMEW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00648 | PBM | Transfer from LOC_Os05g36160 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001149687.1 | 3e-83 | uncharacterized protein LOC100283313 | ||||
Swissprot | Q0JHF1 | 4e-55 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | B6TGZ0 | 7e-82 | B6TGZ0_MAIZE; G-box-binding factor 4 | ||||
STRING | GRMZM2G132868_P01 | 1e-82 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 1e-16 | G-box binding factor 4 |
Publications ? help Back to Top | |||
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