PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016651635.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 560aa    MW: 63110.3 Da    PI: 6.9596
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016651635.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64e-11267307545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_016651635.1 267 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQEL 307
                     7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8260309No hitNo description
SMARTSM003384.9E-8263335IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243265309IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-7267309No hitNo description
CDDcd147081.36E-22267319No hitNo description
PfamPF001702.8E-8267307IPR004827Basic-leucine zipper domain
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
PfamPF141443.1E-32358431IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MGFSRGFNFA EDEEEEKGEQ ILLETKLLAC ARTSSVFMAS SIQGNNQLEH QQQQQQHHQI  60
QDHHQHQHHQ QQQIQYGMMQ SSSSNIPXXX XFTIIIFPXS YNFMFLDXLX FCVIRSKDSG  120
AYDLGELDQA LFLYLDGQSQ DHHNSSSTAT ATTTHHLHQD TQRHHQNNSL SGMRPPTLNI  180
FPSQPMHVEP PSTKAAGTGL VSPAATSGSK RPSEPSMDLE NPRNDASAPA PSSRPQEPAK  240
AIKREGNRKG PTTSSSEQEG PKTPDPKTLR RLAQNREAAR KSRLRKKAYV QQLETSRIKL  300
TQLEQELQRA RSQGMFFGGG IVGGDQQGLP LGMNSISSDA AVFDIEYARW QEEHHRLMCE  360
LRAAVQEHLP ENELRLFVDN CLAHYDEVMN LKSMVAKTDV FHIVSGMWKT PAERCFMWMG  420
GFRPSEVIKI ILNQIEPLTE QQLLGICGLR QSTQEAEEAL SQGLEALNQS LSDTITSDSL  480
SCPPNMANYM GQMAIAMNKL STLEGFVRQA DNLRHQTIHR LQQILTTRQA ARCLLAMAEY  540
FHRLRALSSL WMGRPRQDQS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016651635.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016651635.10.0PREDICTED: LOW QUALITY PROTEIN: transcription factor TGA2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLM5VWI10.0M5VWI1_PRUPE; Uncharacterized protein
STRINGXP_008241036.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein