PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016515157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 633aa MW: 71189.4 Da PI: 4.6635 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.2 | 5.4e-52 | 23 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLkkk+ +k++ l ++i+e+d+yk++P+dLp +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++ XP_016515157.1 23 PPGFRFHPTDEELVLYYLKKKICRKRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC 116 9*************************999.99**************96559999***************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfykgrap ge+tdWvmhey++ XP_016515157.1 117 -NSRAVGVKKTLVFYKGRAPVGERTDWVMHEYTM 149 .999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-59 | 18 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.552 | 22 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-27 | 23 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0070301 | Biological Process | cellular response to hydrogen peroxide | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence Send to blast |
MKMLELTDSD SFACFGSAKN VFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY 60 KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRIITCNSRA 120 VGVKKTLVFY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN 180 EQYGAPFREE DWVDDECPST KASVRLVDDE RPSAKASVRL VDDERPSAKA SVRQDTSAKH 240 VNEAPSVDGG LEEFLNNIAA DAVFVEPLCV DYDYALEQLV LEEDTESTLL DHSSGEINFP 300 NHSAVISPSC QQYHAKESFD LTQSGTSQLQ LHEAPEVTSA PVSREQQCHV VEEDFLEDYL 360 EMNDLLGPEP SIQNFDNPEL GVKNFDEAGP SGQNFDKPAG NFEDLQFDYL DGLTEFDLYH 420 DAPLLLDDIR TTDVGQITEP YMNNFVNGAV NPVSTTYLST FQNEMVNHQP MYLNNGEQIS 480 NQLWTHDQRF NIYNPIEANQ LVVPPATSGV VYDSNLANHH MGANQNQIVR QDNGTPSWFS 540 SQLWAFVDSI PTTPAAAAES PLVNGAFKRM SSFSKLRINA RNMNVVAGNT VTSSSLGNSK 600 NGVFYFSFLG ILCAILCVLV GTYVKVLGRY ISS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-48 | 22 | 149 | 15 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00179 | DAP | Transfer from AT1G34190 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016515157.1 | 0.0 | PREDICTED: NAC domain-containing protein 17-like | ||||
TrEMBL | A0A1S4DP08 | 0.0 | A0A1S4DP08_TOBAC; NAC domain-containing protein 17-like | ||||
STRING | XP_009613291.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3212 | 24 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-126 | NAC domain containing protein 17 |