PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016509570.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 263aa    MW: 30092.4 Da    PI: 9.0785
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016509570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.26e-4491363128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPt eel+++yLk+ +++kkl+  +vi+ v+iy ++Pw+Lp   ++ +e+ewyfF++ ++k+  + ++nr+t++g+Wkatg+d ++ s+ 
  XP_016509570.1   9 PGFRFHPTAEELINFYLKRIIKDKKLDS-NVIAFVNIYLHDPWELPvGLARIGEREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDCQIRSTl 102
                     9*************************99.99***************556677999*************************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++glkktLvfy grapkg +tdWvm+eyrl
  XP_016509570.1 103 dPKKVIGLKKTLVFYVGRAPKGCRTDWVMNEYRL 136
                     88889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100549.1787156IPR003441NAC domain
SuperFamilySSF1019413.4E-508156IPR003441NAC domain
PfamPF023655.2E-249136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MSLPELELPG FRFHPTAEEL INFYLKRIIK DKKLDSNVIA FVNIYLHDPW ELPVGLARIG  60
EREWYFFVPI NRKHGPKGKP NRTTRNGFWK ATGSDCQIRS TLDPKKVIGL KKTLVFYVGR  120
APKGCRTDWV MNEYRLPDGH PLPKDHDIVL CKVYRKATSF KVLEQRAIAE EHAAKRHPTS  180
TQSDDNLGPL FPQEDLESSA SHNLISFRSL QEENHNTAIK LPQLSASNPF LEPPKFSIDS  240
LSSPLWTEIQ STGQDLWSLF SLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A5e-39115918171NAC domain-containing protein 19
3swm_B5e-39115918171NAC domain-containing protein 19
3swm_C5e-39115918171NAC domain-containing protein 19
3swm_D5e-39115918171NAC domain-containing protein 19
3swp_A5e-39115918171NAC domain-containing protein 19
3swp_B5e-39115918171NAC domain-containing protein 19
3swp_C5e-39115918171NAC domain-containing protein 19
3swp_D5e-39115918171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016509570.10.0PREDICTED: putative NAC domain-containing protein 94 isoform X1
SwissprotQ10S653e-76NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A1S4D8010.0A0A1S4D801_TOBAC; putative NAC domain-containing protein 94 isoform X1
STRINGXP_009606805.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35312248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-82NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]