PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_016474545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 27010.7 Da PI: 9.9938 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.4 | 6.8e-24 | 11 | 142 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +G rFhPtd e++ +yL v++++l+l++ ++ +d+y ePw++ + +++++ yf ++++k+++t kr +r++ +g+Wk + k ++ XP_016474545.1 11 MGHRFHPTDREVL-KYLVGFVRNEPLPLQNElMQVADLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRD 104 79*********99.9**********99987746666*997559****642442222344466********************************* PP NAM 92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 v++ kg+l+g k+L + +++++ ++ +W+m ey+l XP_016474545.1 105 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 142 ******************656888889*********97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.5E-28 | 9 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.284 | 9 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-12 | 11 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence Send to blast |
MAENSSSHRS MGHRFHPTDR EVLKYLVGFV RNEPLPLQNE LMQVADLYAD KEPWQIFEAY 60 DRGNNNNNNT RYFITPQKKE KPTWKRVSRT VGKGTWKLQN KGRDVFDDKG RLMGYVKSLK 120 YIPANKSSNN VNGEWLMTEY SLFDRYLVAG EIKNKGFVIC KIKKKGKPGD KKKGNNIEEV 180 VNDEKMREIE EFIKSVLQED VQVEDNGIRS SGTIAKDXIL LMTWMMRMFN IA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016474545.1 | 1e-172 | PREDICTED: NAC domain-containing protein 101-like | ||||
TrEMBL | A0A1S4ACZ7 | 1e-170 | A0A1S4ACZ7_TOBAC; NAC domain-containing protein 101-like | ||||
STRING | XP_009601217.1 | 1e-153 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-14 | NAC-domain protein 101 |