PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016461013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 297aa MW: 34086.6 Da PI: 7.0086 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73 | 7.6e-23 | 68 | 197 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +G+rFhPt+ el+ ++Lk+ ++g+ l+ e ++ +diy Pw++ ++ ++ +ek y F++ +k++++ +r +r+ ++g+Wk + +++ XP_016461013.1 68 MGVRFHPTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWEIFgANSDHpKEKVRYIFTRLKKQKSEHTRVRRTCANGTWKGQTGIDPIK 161 7************.9*********977755459999***87368***7333333255566**************************8888899** PP NAM 94 skkgelvglkktLvfykgrapkge.ktdWvmheyrl 128 ++kg++vg ++ + f + r+++ge + +W+m+ey++ XP_016461013.1 162 NAKGTVVGFRRCFKFQTSRSKEGEhNKNWLMKEYSV 197 *9**************999999874789******86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.28E-27 | 61 | 219 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.104 | 66 | 220 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.5E-15 | 68 | 197 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MAWSPIHMYI AADFRTCGPF SAPTEQLLRP DDHFCGFHLN PENCTCGLAE NKSSSLCELP 60 AARRGCIMGV RFHPTEAELI NFLKRFLKGE LLPSECPNFQ LADIYGDQPP WEIFGANSDH 120 PKEKVRYIFT RLKKQKSEHT RVRRTCANGT WKGQTGIDPI KNAKGTVVGF RRCFKFQTSR 180 SKEGEHNKNW LMKEYSVGND FFRENNIPKE DIVVCRIKKN IRSKKNHGVN MEEQDVPKAI 240 EAMLHGPDED YCTTVQPATI CQAADQHQVN DWSNYQQEVN WADDMLIGID EFGDIIW |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753260 | 0.0 | EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016461013.1 | 0.0 | PREDICTED: NAC domain-containing protein 53-like | ||||
TrEMBL | A0A1S3Z9G0 | 0.0 | A0A1S3Z9G0_TOBAC; NAC domain-containing protein 53-like | ||||
STRING | XP_009793650.1 | 1e-173 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 4e-16 | NAC domain containing protein 2 |