PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016461013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 297aa    MW: 34086.6 Da    PI: 7.0086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016461013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM737.6e-23681973128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     +G+rFhPt+ el+ ++Lk+ ++g+ l+ e   ++ +diy    Pw++  ++ ++ +ek  y F++ +k++++ +r +r+ ++g+Wk +    +++
  XP_016461013.1  68 MGVRFHPTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWEIFgANSDHpKEKVRYIFTRLKKQKSEHTRVRRTCANGTWKGQTGIDPIK 161
                     7************.9*********977755459999***87368***7333333255566**************************8888899** PP

             NAM  94 skkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                     ++kg++vg ++ + f + r+++ge + +W+m+ey++
  XP_016461013.1 162 NAKGTVVGFRRCFKFQTSRSKEGEhNKNWLMKEYSV 197
                     *9**************999999874789******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-2761219IPR003441NAC domain
PROSITE profilePS5100527.10466220IPR003441NAC domain
PfamPF023653.5E-1568197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MAWSPIHMYI AADFRTCGPF SAPTEQLLRP DDHFCGFHLN PENCTCGLAE NKSSSLCELP  60
AARRGCIMGV RFHPTEAELI NFLKRFLKGE LLPSECPNFQ LADIYGDQPP WEIFGANSDH  120
PKEKVRYIFT RLKKQKSEHT RVRRTCANGT WKGQTGIDPI KNAKGTVVGF RRCFKFQTSR  180
SKEGEHNKNW LMKEYSVGND FFRENNIPKE DIVVCRIKKN IRSKKNHGVN MEEQDVPKAI  240
EAMLHGPDED YCTTVQPATI CQAADQHQVN DWSNYQQEVN WADDMLIGID EFGDIIW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461013.10.0PREDICTED: NAC domain-containing protein 53-like
TrEMBLA0A1S3Z9G00.0A0A1S3Z9G0_TOBAC; NAC domain-containing protein 53-like
STRINGXP_009793650.11e-173(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-16NAC domain containing protein 2