PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016454586.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 308aa    MW: 35820 Da    PI: 4.8529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016454586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.17.1e-2381333128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     p +rF Ptd el+ ++L+k ++g++++ e  i+ ++iy    Pw++  +   eek  yf s+ +k+++++kr +r+ ++g+Wk + +  ++++ k
  XP_016454586.1   8 PSVRFYPTDAELI-YFLRKFLKGNSFPSECPIRLAEIYGDrPPWEISDH--PEEKIGYFISPLKKRKESDKRFRRTCANGTWKGQTSGDPIKNGK 99 
                     789**********.************99667*******87478***733..344556************************************** PP

             NAM  97 gelvglkktLvfy.kg.rapkgektdWvmheyrl 128
                     g++vg +k +v+  +g +++k  k +W+m ey +
  XP_016454586.1 100 GTVVGFRKNFVYRtRGsKQSKQDKINWLMREYYV 133
                     ************96444777888*********75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-275155IPR003441NAC domain
PROSITE profilePS5100527.0146156IPR003441NAC domain
PfamPF023651.5E-148132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MPIVSRLPSV RFYPTDAELI YFLRKFLKGN SFPSECPIRL AEIYGDRPPW EISDHPEEKI  60
GYFISPLKKR KESDKRFRRT CANGTWKGQT SGDPIKNGKG TVVGFRKNFV YRTRGSKQSK  120
QDKINWLMRE YYVGDDYFRE NNIPKQDIVL CRIKKNIITE RNMKNGVTIE EQEVAQVIAA  180
MLCEPDYNST QSATICQQHQ DNYLRGLNKN SQILTTYDTD EATLENHGAI TNREYMMTEE  240
ANTTACGQEE AYDQLSFPGI QEQYYAEADL NADNSDFSDL NIDNSDYLEE LMNGIDDIVP  300
HDWWHQFY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016454586.10.0PREDICTED: NAC domain-containing protein 55-like
TrEMBLA0A1S3YQU70.0A0A1S3YQU7_TOBAC; NAC domain-containing protein 55-like
STRINGXP_009787362.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-18NAC domain containing protein 2