PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_015897396.1

Organism

Ziziphus jujuba

Taxonomic ID

326968

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus

Family

BES1

Protein Properties

Length: 137aa MW: 15695.8 Da PI: 9.2766

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_015897396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	126.9	2.4e-39	33	124	3	93
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspess 93 + r pt+ Er nnk RER+RRa++ ki+aGLRa+Gny lp+ aD n+VlkA c+eAGw+v dDGt+y + s+++ +++e +s+s + + XP_015897396.1 33 KFRYPTETERHNNKERERHRRAVTQKIFAGLRAHGNYDLPQYADFNDVLKAVCKEAGWIVGDDGTVYGRMSSKNaSNKEFCTIISSMSENDE 124 6699***************************************************************9887777577777666666666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.3E-34	34	120	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
MAGEKTVIRG CIKKTRGPWK VQRTTKDGRL VTKFRYPTET ERHNNKERER HRRAVTQKIF 60 AGLRAHGNYD LPQYADFNDV LKAVCKEAGW IVGDDGTVYG RMSSKNASNK EFCTIISSMS 120 ENDEYCCCEN QIEKVLA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-13	54	99	391	436	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-13	54	99	391	436	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-13	54	99	391	436	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-13	54	99	391	436	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_015897396.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017976358.1	2e-47	PREDICTED: protein BZR1 homolog 3
TrEMBL	A0A2G2VSM1	5e-46	A0A2G2VSM1_CAPBA; BES1/BZR1-like protein 1
TrEMBL	A0A2G3BEC2	5e-46	A0A2G3BEC2_CAPCH; BES1/BZR1-like protein 1
STRING	EOY07087	9e-47	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15152	11	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36780.1	1e-17	BES1/BZR1 homolog 2