PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015897347.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 326aa    MW: 37477.2 Da    PI: 8.1674
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015897347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.23.3e-23134194259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK++ ++++prsY+rCt++   +C+++k+v+r +edp +  +tY  +H+++
  XP_015897347.1 134 GDGHSWRKYGQKTILNAKYPRSYFRCTHKydqSCQAQKRVQRIQEDPPLYRTTYFRQHTCR 194
                     59**************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-23125194IPR003657WRKY domain
SuperFamilySSF1182902.48E-23127194IPR003657WRKY domain
PROSITE profilePS5081118.992128191IPR003657WRKY domain
SMARTSM007741.1E-33133195IPR003657WRKY domain
PfamPF031062.1E-23135194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTDIFWPGNL ATRRKMVIKE LMEGRKLANQ ILNLLLAKPG DIGSDQSAED LVMKIMKSFS  60
NSISILNLQL NEGEHDEVLA SRTQADHISH VDAWKTEGRE ESCRSPSTVK DRRGRYKRRR  120
TSETWIRNDL TRIGDGHSWR KYGQKTILNA KYPRSYFRCT HKYDQSCQAQ KRVQRIQEDP  180
PLYRTTYFRQ HTCRKNFLIK APEFILEDIT TKKHTTPEEA STSNGIDAIK HEHPCFLSST  240
FPSIKKEFVE EKTCNNMNHN HSLSPDYIMS ADHDHLMASE ASTHVSRTTT FSSSSLLTDH  300
GNVLSGMMES VGFDDDILQF LSDGFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-23133194869OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015897347.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015897347.10.0probable WRKY transcription factor 70
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-32WRKY DNA-binding protein 70