PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096259.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 293aa MW: 32239.9 Da PI: 7.8183

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.1	1.3e-35	44	100	3	59
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++ lkcprC stntkfCyynny+ sqPr+fCk+C+r+WtkGG+lrnvPvGggr++++ XP_011096259.1 44 SEPLKCPRCASTNTKFCYYNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKR 100 6789***********************************************976655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-23	42	100	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.7E-31	46	99	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.391	47	101	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	49	85	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MGLSSKQVSG DQGLDWGRTL LQSGTAELSK SPSIRRQQPL HQSSEPLKCP RCASTNTKFC 60 YYNNYNKSQP RHFCKSCKRH WTKGGTLRNV PVGGGRKNKR PKIISKVATT TSATTVPLPT 120 TTLQQEFPNF LSTGDQKRIP EIVYQALIRS SSPLLHETTD GMSISIPEKL FMGSNGTNTI 180 SSTGLNVSAP QNSNTEFQFS SLSTFDMNAS LIPTSYQSLN YTYDHNYGGN LDSLEESSIT 240 TVNIPSTSSV PWPGPDSMSP MDLPNCWNWN EIDALTSADL NISWDDDVAE TKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096259.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096259.1	0.0	dof zinc finger protein DOF1.4-like
TrEMBL	A0A2G9HFL0	1e-117	A0A2G9HFL0_9LAMI; Uncharacterized protein
STRING	Migut.M01177.1.p	1e-80	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6171	20	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-29	DOF zinc finger protein 1