PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011092943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29231.5 Da PI: 8.6886 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 147.1 | 9.2e-46 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk v gkkl+ ++i ++iy+++P+dLp +k +e+ewyfF++rd+k+ +g r++r+tk+g+Wkatg+d++vls XP_011092943.1 11 PGFRFHPTEEELLNFYLKSMVLGKKLRG-DIIGFLNIYNHDPKDLPGLAKIGEREWYFFVPRDRKHGSGGRPSRTTKNGFWKATGSDRKVLSMsd 104 9*************************99.99***************8888899*************************************99865 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ glkktLvfy+grap+g++tdW+m+eyrl XP_011092943.1 105 LKKMLGLKKTLVFYEGRAPRGRRTDWIMNEYRL 137 56779**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 53.049 | 9 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.29E-54 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-24 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MDEPHDQLDL PGFRFHPTEE ELLNFYLKSM VLGKKLRGDI IGFLNIYNHD PKDLPGLAKI 60 GEREWYFFVP RDRKHGSGGR PSRTTKNGFW KATGSDRKVL SMSDLKKMLG LKKTLVFYEG 120 RAPRGRRTDW IMNEYRLPDS CSPPSKDIVL CKIYRKATSL KVLEQRAAME EEVKTYSSPS 180 PLTSSLHPVS SSDQFEDVNS TSSNRRISTC TGLVLPNGIE NLAELQVPKI GIDWNQDCLW 240 TLENLTPYLP MCQFSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-44 | 11 | 156 | 17 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011092943.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092943.1 | 0.0 | NAC domain-containing protein 35-like | ||||
Swissprot | Q10S65 | 8e-85 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2G9I7J9 | 1e-130 | A0A2G9I7J9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B00028.1.p | 1e-119 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 8e-96 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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