PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076897.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 563aa    MW: 62571.3 Da    PI: 4.3471
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.27.9e-54171441128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdeelv +yL++kv gk +++ ++i+e+diyk+ePwdLp  +++k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd++v+
  XP_011076897.1  17 LAPGFRFHPTDEELVRYYLRRKVCGKGFRF-DAISEIDIYKAEPWDLPsfSRLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRAVY 110
                     579**************************9.99***************5448888889************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k + vg+kktLv+++grapkg++t+Wvmheyrl
  XP_011076897.1 111 H-KAQIVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 144
                     *.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-6114167IPR003441NAC domain
PROSITE profilePS5100557.76617167IPR003441NAC domain
PfamPF023655.1E-2819144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009819Biological Processdrought recovery
GO:0010150Biological Processleaf senescence
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MDSVAGKKKS SGSSSMLAPG FRFHPTDEEL VRYYLRRKVC GKGFRFDAIS EIDIYKAEPW  60
DLPSFSRLKT RDLEWYFFSV LDKKYGNGAR TNRATEKGYW KTTGKDRAVY HKAQIVGMKK  120
TLVYHSGRAP KGQRTNWVMH EYRLADLELE KAGIVQDAFV LCRVFQKSGS GPKNGEQYGA  180
PFVEEEWDDD ELELVPKEEA AEEVDFVDDA YLDGDDLEQI LGPDVPSDTS PLPLKFQPAD  240
GSYGEETAES VNDTQQLLVN AGEQYCEAEQ HEDKNFYDLP APYDMTVRAV KHEYIGESSK  300
SGNSDDLDYL LDEPFLDSSD NLQYGNGGFI ESNDLPNSAA ETNTSAFDML EEYLTFFGAN  360
DDNAQHFAYD PSVMLGSEEL ISDQALLPQE LNGETEKSTL LSGQIDDNND NDAASPSDKQ  420
DSAKYESDVQ YPFIKQASHM LGSIPAPPAF AAEFPSKSTT LRLNSLSQPS SSVHVTAGMI  480
QIRNLTTDGN GRVQSFGKPE NFNIVLSFGF SRGNDGSASL ESSVSILPGK TLSTLSRGWF  540
CFIFFWVLIL SMSFKIGTCI CAK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-471717317171NO APICAL MERISTEM PROTEIN
1ut4_B7e-471717317171NO APICAL MERISTEM PROTEIN
1ut7_A7e-471717317171NO APICAL MERISTEM PROTEIN
1ut7_B7e-471717317171NO APICAL MERISTEM PROTEIN
3swm_A8e-471717320174NAC domain-containing protein 19
3swm_B8e-471717320174NAC domain-containing protein 19
3swm_C8e-471717320174NAC domain-containing protein 19
3swm_D8e-471717320174NAC domain-containing protein 19
3swp_A8e-471717320174NAC domain-containing protein 19
3swp_B8e-471717320174NAC domain-containing protein 19
3swp_C8e-471717320174NAC domain-containing protein 19
3swp_D8e-471717320174NAC domain-containing protein 19
4dul_A7e-471717317171NAC domain-containing protein 19
4dul_B7e-471717317171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00343DAPTransfer from AT3G10500Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076897.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076897.10.0NAC domain-containing protein 53 isoform X1
TrEMBLA0A2G9I3Z20.0A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRINGMigut.F01913.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-139NAC domain containing protein 53