PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074131.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 586aa    MW: 65189.5 Da    PI: 4.6123
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.5e-52151412128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppGfrFhPtdeelv +yLk+k+  k+l+l +vi+e+d+yk++P++Lp  +k+k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+ + +
  XP_011074131.1  15 PPGFRFHPTDEELVLYYLKRKICCKRLHL-DVIAETDVYKWDPEELPgmSKLKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRVISC 108
                     9****************************.99***************64489999***************************************9 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ vg+kktLvfy+grap+ge+tdWvmhey++
  XP_011074131.1 109 -GSRPVGIKKTLVFYRGRAPSGERTDWVMHEYTM 141
                     .9******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-6012164IPR003441NAC domain
PROSITE profilePS5100555.80414164IPR003441NAC domain
PfamPF023653.6E-2715140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MKVDSDCFGG GKAFPPGFRF HPTDEELVLY YLKRKICCKR LHLDVIAETD VYKWDPEELP  60
GMSKLKTGDR QWFFFSPRDR KYPNGARSNR ATRHGYWKAT GKDRVISCGS RPVGIKKTLV  120
FYRGRAPSGE RTDWVMHEYT MDEEELKRCH TAKEYYALYK VYKKSGPGPK NGEQYGAPFR  180
EEDWADDELG VQCISEQENL GKPATEIVPT NVTKSVNCQP LSSLDDLEEI MSRILDEPTP  240
IQPPVDHGYA LDSFSGEEET RSTLVNHPSR DMSLPVGQPF SQQPSLPISF DLTKSDTTQL  300
QLCEAPEVSS APIINVQDPL DTEEDFLEDF LEMNDLIGPD PTTQNPDKPS NDLERLQFDG  360
FDALNELDLY QDASSFLCEA GPVDSGQISQ PYMNNFDNGV INPVSSLYLN HLEDDTATHL  420
LQQQFNHSDG INYQLWADDQ SCSALTAAEA NQGFITSSSS GGLHQNPNPN HGFVNYPAGA  480
NQNGSAKQDD GTDSWFSSAL WSFVESIPTT PASASESALV NRAFERMSSF SRIRINARNM  540
NVAAGNASAT SRHSGKSRTG FICISLLGVL CAILWVLIGS FVKLMS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-481317016171NO APICAL MERISTEM PROTEIN
1ut4_B2e-481317016171NO APICAL MERISTEM PROTEIN
1ut7_A2e-481317016171NO APICAL MERISTEM PROTEIN
1ut7_B2e-481317016171NO APICAL MERISTEM PROTEIN
4dul_A2e-481317016171NAC domain-containing protein 19
4dul_B2e-481317016171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074131.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074131.10.0NAC domain-containing protein 17-like
TrEMBLA0A2G9I6C60.0A0A2G9I6C6_9LAMI; Uncharacterized protein
STRINGMigut.N02932.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-144NAC domain containing protein 17