PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011073111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 26930.1 Da PI: 9.5269 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128 | 7.4e-40 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrF+Ptdee+v +yL++k+ + +l++ +vi+e+++++++Pw+Lp +++++ yfFs+ r+++y++ +r++r+t gyWk tg+dk++++ XP_011073111.1 14 LPPGFRFQPTDEEIVFQYLARKTFSYPLPA-SVIPEINVFSFHPWELPG---NSDQDRYFFSHlRESSYRSVNRSSRTTCGGYWKITGSDKQIVC 104 79****************************.99***************3...45677787765267788899*********************99 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+k+tLvfykg++p++++tdW+mh y + XP_011073111.1 105 LkRMPIVGIKRTLVFYKGKHPRAVRTDWFMHLYCI 139 635556*************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-47 | 10 | 173 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.963 | 14 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-20 | 15 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MDKFNFVRDG ESKLPPGFRF QPTDEEIVFQ YLARKTFSYP LPASVIPEIN VFSFHPWELP 60 GNSDQDRYFF SHLRESSYRS VNRSSRTTCG GYWKITGSDK QIVCLKRMPI VGIKRTLVFY 120 KGKHPRAVRT DWFMHLYCIA LSGNVACNIQ QKRSSQGSSV QIGKWVLCHV FTKKRGTKAE 180 VDSNSRRRNY DFMITGETSD TDSSSASSSS YSCDSDSSAV SEVSSNTANS ETNSGRNV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-37 | 8 | 174 | 7 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011073111.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073111.1 | 1e-179 | NAC domain-containing protein 83 | ||||
TrEMBL | A0A2G9GSQ5 | 1e-111 | A0A2G9GSQ5_9LAMI; Uncharacterized protein | ||||
STRING | PGSC0003DMT400011069 | 4e-82 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1387 | 23 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 6e-56 | NAC domain containing protein 83 |