PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943606.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 709aa    MW: 77392.6 Da    PI: 6.3604
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943606.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.62.2e-32264321260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers  d++++ei+Y+g+Hnh+k
  XP_010943606.1 264 EDGYNWRKYGQKHVKGSEYPRSYYKCTHQSCQVKKKVERSL-DGQITEIIYKGTHNHPK 321
                     7****************************************.***************85 PP
2WRKY104.74.8e-33478536159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe
  XP_010943606.1 478 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERASHDLKSVITTYEGKHNHE 536
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-29254322IPR003657WRKY domain
SuperFamilySSF1182901.96E-25262322IPR003657WRKY domain
SMARTSM007746.1E-36263321IPR003657WRKY domain
PROSITE profilePS5081123.743264322IPR003657WRKY domain
PfamPF031066.2E-25264320IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.3E-37463538IPR003657WRKY domain
SuperFamilySSF1182907.72E-29470538IPR003657WRKY domain
PROSITE profilePS5081137.539473538IPR003657WRKY domain
SMARTSM007744.0E-38478537IPR003657WRKY domain
PfamPF031062.9E-25479536IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    Send to blast
MESVSSARKN QMTSSVHCME EKEESIGMWG EAGEGGGGGV GGGSMEPGPS AGKNAGSIAE  60
RRAAMSGFNP TPRLNTARFR SVSPLSSPGV RSPFLTIPPG LSPTALLDSP VMLPNSQAQP  120
SPTTGSFQLP SPGHEILALY AVNACTDKAN CEDIDSSFMF KTQTNNVSVP CLQSAQQMRM  180
DFEDQACITK QEKGYASDLQ RDVNVSEDNM VEAKCSSVQT CYHPPISNQA HHPEDLSNGK  240
DTQSEQIFEE DQSFSSSGVG RPSEDGYNWR KYGQKHVKGS EYPRSYYKCT HQSCQVKKKV  300
ERSLDGQITE IIYKGTHNHP KPQPTRRSAF GSSFLMNEIS DSAAGFGSIT NVEGGSIWRN  360
SQKGSKDKNC VDLRADGLEL TSSTSVVTEL SDPLSTAQEK CSNILTDIPE LSSTLASQGV  420
DEDGATQGSM PFEDDDEDDE TESKRRKKES CVIDSNPASR AVREPRVVVQ TVSEVDILDD  480
GYRWRKYGQK VVKGNPNPRS YYKCTHPGCS VRKHVERASH DLKSVITTYE GKHNHEVPVA  540
RNNNHMISGS SMQPASNAQT SMTLPGSTTA SRPQTQVQNL APHFDKKFEF GCGNFTAGYA  600
GCFTGNSKVG ASPCYEMQMP HLESVSFSTF GLNNSYSGAH QAIPISNIIQ DFSISFPTSH  660
VRHSNLTLAG YDVNNHGRPS SIELHPLIMQ QSRESDMKQF RQPKPEQDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-35253538277Probable WRKY transcription factor 4
2lex_A1e-35253538277Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943606.10.0probable WRKY transcription factor 20 isoform X3
TrEMBLA0A2H3YID40.0A0A2H3YID4_PHODC; probable WRKY transcription factor 3
STRINGXP_008799188.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-103WRKY DNA-binding protein 2