PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942838.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 299aa    MW: 33049.1 Da    PI: 6.6024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942838.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-11226273355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +  Er+RR+riN+++  L+ l+P+      +K + +++Le+Av+Y+k Lq
  XP_010942838.1 226 TSQSLYERKRRERINKRLRILQYLVPNG-----TKADISTMLEEAVQYVKFLQ 273
                     667788********************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.03E-14221286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-14222282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.078223272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-8225273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-10229278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.52E-11232277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MESEGLVSEA SWNSFDVAMS AKESDMIAHL LGGHQFLNEL DQDRRIEMPP IFWPDHGADL  60
YHCLDEMNHN SYCFSPVTSS TSTSSFSLPL ANNGGYYSSD SNAVLEISTS PTTKDFSTGK  120
EQIIAQSLPA VSCHQFNEPI CVTMKISSDE FRVSKEKTLV PALPSHQNSQ AIKKRIHVSD  180
AEQPTTNEKD GISIGSPKKK ARASAPEMNG GGGASSRSAP SPSEKTSQSL YERKRRERIN  240
KRLRILQYLV PNGTKADIST MLEEAVQYVK FLQLQIKLLS SHELWMYAPT AYNGINIGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231236ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029116437.10.0transcription factor bHLH85-like
TrEMBLA0A2H3XQD21e-146A0A2H3XQD2_PHODC; LOW QUALITY PROTEIN: transcription factor bHLH84-like
STRINGXP_008787223.11e-147(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116802832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-27bHLH family protein