PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924759.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 328aa    MW: 36481.8 Da    PI: 5.4854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924759.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.86.9e-31134192259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp ++++tY+ eHnh+
  XP_010924759.1 134 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRTDPAMLVVTYTAEHNHP 192
                     69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.8E-31120194IPR003657WRKY domain
PROSITE profilePS5081133.855128194IPR003657WRKY domain
SuperFamilySSF1182903.66E-26131194IPR003657WRKY domain
SMARTSM007742.9E-37133193IPR003657WRKY domain
PfamPF031061.2E-25135192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MDVDNWDLQA VVRGCCLTRP STDPFSSFPP LLLKEEQVDG EKDILFGFPD IMDTEKSFHE  60
LEELCKPFFL KPQQQPLEQQ QQQQSLPSPQ QGNPSQQQRR LPQRPVTNSN PRSKRRKNQQ  120
KRAVCHVPAD GLPSDMWAWR KYGQKPIKGS PYPRGYYRCS SSKGCLARKQ VERSRTDPAM  180
LVVTYTAEHN HPLPTHRNSL AGSTRQKQPP PPSPTATSPS ASGSDRMPPS IPQSSSVKDK  240
LLRQRKGMEE EEEDEEGEEM LMVEDMEMAG EEDVVFLGLE RLVEGTDVGA ANSPALSGFY  300
ADEGGLAEHF FASTWLATNN AAAAAGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-211351951880Disease resistance protein RRS1
5w3x_D2e-211351951880Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924759.10.0WRKY transcription factor 22
TrEMBLA0A2H3Y2E31e-178A0A2H3Y2E3_PHODC; WRKY transcription factor 22-like isoform X2
STRINGXP_008792407.11e-179(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53583361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-56WRKY family protein