PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916400.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 275aa MW: 30657.7 Da PI: 5.9295

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916400.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.8	1.9e-08	165	212	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+riN+++ L++l+P + k + a +L + ++Y++sLq XP_010916400.1 165 SHSLAERVRRERINEKMRCLQDLVPGC----YKAMGMAGMLDEIINYVQSLQ 212 8*************************8....355999999999999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	4.56E-10	159	216	No hit	No description
SuperFamily	SSF47459	2.75E-16	159	228	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.65	161	211	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.5E-16	161	223	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	9.9E-6	165	212	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.5E-9	167	217	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MAEFLDNFNC LKPSLPFVEM DPSFELMMAH FAELNGTDME NSSEGLMGFS SENCLSHLPE 60 FSMPFADNLP SFLSPECAKP ITISQPVASD GEQSHGDRKR KAKAAPETSS ANSSEPRTQS 120 CIRDDKSKKK TGSGSVKRRR SNSKEVEKPK EVVHVRARRG QATDSHSLAE RVRRERINEK 180 MRCLQDLVPG CYKAMGMAGM LDEIINYVQS LQNQVEFLSM KLSAASSFYD YSLELEAMAT 240 PQVHFESTNN LFICSIGRGE ADEQGPHLAI MFPKE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916401.1	1e-179	transcription factor bHLH75
TrEMBL	A0A2H3YEZ1	1e-147	A0A2H3YEZ1_PHODC; transcription factor bHLH75-like isoform X1
STRING	XP_008797805.1	1e-147	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15639	6	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	1e-49	BR enhanced expression 1