PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915678.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 373aa    MW: 41915.3 Da    PI: 5.6461
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915678.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.4e-29136196158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp++++itY+g+H++
  XP_010915678.1 136 LDDGFSWRKYGQKDILGAKHPRGYYRCTYRktqGCLATKQVQRSDEDPSIFDITYRGTHTC 196
                     59***************************98889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-28130196IPR003657WRKY domain
PROSITE profilePS5081123.204131194IPR003657WRKY domain
SuperFamilySSF1182909.94E-26134196IPR003657WRKY domain
SMARTSM007747.5E-42136198IPR003657WRKY domain
PfamPF031061.7E-27137196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MEKGTSWDLS LLIEELTQGE EQAGQLEARL DEPSSTELCK SLAQQIRLRI NKAISMAKSI  60
NSEGSQQPPC PNNTSSGSPR SASGSPRSEN SERAFKEHER REMSKKRFCN ENFRKTLAKW  120
TSQVRATVGA NAEGPLDDGF SWRKYGQKDI LGAKHPRGYY RCTYRKTQGC LATKQVQRSD  180
EDPSIFDITY RGTHTCLHRP RVHSAYSASA PQAPDMQQNQ QNPPADHDQQ HPQHDQQLLE  240
SFRTSLKVKT EGLEMEDQVP TSSSFSFPST PASNFKSENQ IFSSPPTLEN NYMSSFFPNF  300
FSPTSSESNY FSVPCQMSCE GRPALHASES DLTDMISAAT SVTNSPMVDL DFMLEPQMDI  360
EPNFPFDNSN FFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-20122194374Disease resistance protein RRS1
5w3x_D7e-20122194374Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915678.10.0probable WRKY transcription factor 41 isoform X1
TrEMBLA0A2H3XHR70.0A0A2H3XHR7_PHODC; probable WRKY transcription factor 41
STRINGXP_008783826.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.14e-40WRKY family protein