PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010910750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 20853.5 Da PI: 10.7354 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr +k +grWv+eIr+p++ r+r++lg++ t+e+Aa+a++aa +l+g XP_010910750.1 36 LFRGVRMRK-WGRWVSEIRVPKS---RTRIWLGSYSTPEKAARAYDAAVYCLRG 85 69*****99.**********954...4*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.34E-25 | 35 | 95 | No hit | No description |
Pfam | PF00847 | 5.1E-12 | 35 | 85 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-33 | 36 | 99 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.6E-30 | 36 | 94 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.17E-21 | 36 | 94 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.694 | 36 | 93 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-9 | 37 | 48 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-9 | 59 | 75 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MEKKVRVKRE RCKSPRREAD SSSRGGGRVI NRRRPLFRGV RMRKWGRWVS EIRVPKSRTR 60 IWLGSYSTPE KAARAYDAAV YCLRGDQARF NFPEDRIRGL HISEEQRLAL AAHEVKAIAM 120 RHAFSVPLDS TPLSSANVAP SSQESSSSAS TGACSAKVRT ATGGDSWWDS QDPDEFLFVD 180 AAAIEE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 5e-15 | 26 | 95 | 4 | 74 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00463 | DAP | Transfer from AT4G31060 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010910750.3 | 1e-133 | ethylene-responsive transcription factor ERF015, partial | ||||
TrEMBL | A0A2H3YNL7 | 1e-96 | A0A2H3YNL7_PHODC; ethylene-responsive transcription factor ERF015 | ||||
STRING | XP_008801457.1 | 2e-97 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3943 | 30 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-30 | ERF family protein |