PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110834.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 296aa    MW: 33293.7 Da    PI: 9.6982
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110834.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015426123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C +sFs+   L  H++ H
  XP_010110834.1  4 HRCKLCLRSFSNGRALGGHMKAH 26
                    79******************998 PP
2zf-C2H214.97.9e-05228250123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C+k+F +   L  H r+H
  XP_010110834.1 228 FECPYCDKVFGSGQALGGHKRSH 250
                     89**************9999999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.19426IPR015880Zinc finger, C2H2-like
PfamPF139122.2E-7427IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.118431IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SMARTSM0035558192212IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.49E-6193250No hitNo description
PfamPF139121.9E-4193210IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.0E-4224251IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.242228250IPR007087Zinc finger, C2H2
SMARTSM003550.013228250IPR015880Zinc finger, C2H2-like
PfamPF139125.4E-13228251IPR007087Zinc finger, C2H2
PROSITE patternPS000280230250IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEKHRCKLCL RSFSNGRALG GHMKAHLAGL PLPPKTPQRQ QQNQQESHEE EEGLEKSYGL  60
RENPKKSLRF ADPELSSGCG SVIQDRESDT DSKTKNPTRP RSKRKRTTRT KPATSTSPCT  120
TPTVSSSVSD TWPEEDVAIS LMMLSRDAWM ADNNIIHDHK SAISMSTSII INKKKKKQKK  180
KKKNGVIRRA KNRCDKCSKV FRSYQAMCGH YKICCYRKSE DCDGEKIFEC PYCDKVFGSG  240
QALGGHKRSH QITSTTNSNS VVEAVKQQQQ QHLGFIDLNL PAPFDDQDDF SVLSDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172182KKKKKQKKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110834.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110834.20.0zinc finger protein ZAT1
TrEMBLW9SGY00.0W9SGY0_9ROSA; Zinc finger protein ZAT9
STRINGXP_010110834.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.19e-26C2H2-like zinc finger protein