PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010109067.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 296aa MW: 33179.1 Da PI: 8.7307

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010109067.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	82	134	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h +Er RR+++ + + Lr+llP + ++K s ++ +Av+YIk+Lq XP_010109067.1 82 KKMKHRDIERLRRQEMATLHASLRSLLPLqL---IKGKRSISDHINEAVRYIKHLQ 134 6899***********************77...*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	4.76E-9	79	138	No hit	No description
SuperFamily	SSF47459	8.64E-12	81	157	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	13.09	81	133	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.1E-8	82	153	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.8E-9	82	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MFPLHQSSEL CFKSSPNPHK KQTISEDLIL GQASLEDKNI AFDTTTHDYD DIKEIIFKLP 60 TDLNNNNNCQ IRSSNIETKN KKKMKHRDIE RLRRQEMATL HASLRSLLPL QLIKGKRSIS 120 DHINEAVRYI KHLQVKIKDL GAKRDGLKKS SDLSTRPTDR DGSVSSSSCS PVPGRFLTVQ 180 SCRGGVEIII GVGDFGEGKC FPLSRILEVL LEEGLSLVSC VSTKVNDRFL HTIQSEVLRT 240 IYIISALGFY SCIYISIRPV ISRTCSIFPS QASNIESINL SALEQKVNEV IDPYSS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010109067.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010109067.1	0.0	transcription factor bHLH120 isoform X1
Refseq	XP_024029678.1	0.0	transcription factor bHLH120 isoform X1
Refseq	XP_024029679.1	0.0	transcription factor bHLH120 isoform X1
Refseq	XP_024029680.1	0.0	transcription factor bHLH120 isoform X1
TrEMBL	W9SBX6	0.0	W9SBX6_9ROSA; Uncharacterized protein
STRING	XP_010109067.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	5e-33	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21396132