PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103665.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 346aa    MW: 38173.4 Da    PI: 5.9704
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103665.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.27.2e-28148208259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqKe+ gs++pr+YYrCt++   +Cp+kk+v+r ++dp+++e++Y+++H+++
  XP_010103665.1 148 DDGYTWRKYGQKEIMGSKYPRGYYRCTHQklyDCPAKKQVQRLDHDPSTFEVIYHSHHTCH 208
                     8****************************9999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-27143209IPR003657WRKY domain
SuperFamilySSF1182902.62E-25144209IPR003657WRKY domain
SMARTSM007741.7E-35147209IPR003657WRKY domain
PROSITE profilePS5081121.253148210IPR003657WRKY domain
PfamPF031063.0E-25148208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MEDYNAALSL ILQGCKLAKE LESNVENPAS EPSALASFCD EIVKVLDEAR GRLRNDHHQD  60
HAGDDQMQMN VHDANLHEWL MRSNSCYADQ AMDMTAHDQD MSGNKMGSTV PFLVSSIGQR  120
PRRRKDDAET RIVNMAAPQI GNTEIPPDDG YTWRKYGQKE IMGSKYPRGY YRCTHQKLYD  180
CPAKKQVQRL DHDPSTFEVI YHSHHTCHMS ATAPSMLPSQ PIIISQDMTH TVAGSTVTTT  240
SSAEPLMSNI TSSTSSVPLG RWLSVEFSTA LGHGTGTSSG ACTSGTGAST GRYNKDQVSH  300
DQFPVVDMAD VMFNFGSSST SNSMDFLFPS VEEKNNDNKG TRKMSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18148207968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120124PRRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103665.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026045.10.0WRKY transcription factor 55
TrEMBLW9RLF30.0W9RLF3_9ROSA; WRKY transcription factor 55
STRINGXP_010103665.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86293142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-52WRKY DNA-binding protein 55