PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102532.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 292aa    MW: 32448.9 Da    PI: 8.2448
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102532.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00044226248223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp Cg  Fs+  +L+ H  + H
  XP_010102532.1 226 ECPQCGAKFSSVTTLVEHVEKvH 248
                     5*****************99888 PP
2zf-C2H215.93.8e-05264286223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp+C++ F+++  L+ H  + H
  XP_010102532.1 264 VCPKCSRGFRDPVALVEHVERdH 286
                     7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183102.49E-13459No hitNo description
Gene3DG3DSA:4.10.1110.104.2E-111053IPR000058Zinc finger, AN1-type
PROSITE profilePS510397.931056IPR000058Zinc finger, AN1-type
SMARTSM001541.3E-51352IPR000058Zinc finger, AN1-type
PfamPF014281.3E-141351IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.108.7E-1191155IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.33E-893146No hitNo description
PROSITE profilePS510398.00598151IPR000058Zinc finger, AN1-type
SMARTSM0035516099129IPR015880Zinc finger, C2H2-like
SMARTSM001540.048101142IPR000058Zinc finger, AN1-type
PfamPF014281.3E-7101141IPR000058Zinc finger, AN1-type
PROSITE profilePS501579.868225253IPR007087Zinc finger, C2H2
SMARTSM003550.019225248IPR015880Zinc finger, C2H2-like
PfamPF138946.4E-4226248No hitNo description
PROSITE patternPS000280227248IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.2E-4229248IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003556.7263286IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.538263291IPR007087Zinc finger, C2H2
PROSITE patternPS000280265286IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MGTPEFPNLG KHCAVDDCKQ IDFLPFTCDR CNLVFCLEHR SYIKHNCPKA DRQDVTVVIC  60
PLCAKGVRLI PDEDPNITWD THVNTDCDPS NYEKVTKKKK CPVPGCKEIL TFSNTLKCRD  120
CLVDHCLKHR FGPDHKCPGP KKPESNFPFM GLLNRSRKEE QRPNKAPATS SPKWATNFLN  180
AASSVRASAE ASMMKLSNEI SQKWQIAKDS VGQSSGNSGR NGEIEECPQC GAKFSSVTTL  240
VEHVEKVHER DGNRPGGKKV TVDVCPKCSR GFRDPVALVE HVERDHGGTS RA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010102532.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102532.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
SwissprotQ0D5B91e-135SAP16_ORYSJ; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
TrEMBLW9RRL30.0W9RRL3_9ROSA; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
STRINGXP_010102532.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-132C2H2 family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]