PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100083.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 352aa    MW: 39208.4 Da    PI: 10.1197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100083.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.2e-32286343359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  XP_010100083.1 286 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 343
                     99***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105337.3E-18237282IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.9E-34272344IPR003657WRKY domain
PROSITE profilePS5081130.641279345IPR003657WRKY domain
SuperFamilySSF1182901.28E-27282344IPR003657WRKY domain
SMARTSM007742.9E-39284344IPR003657WRKY domain
PfamPF031061.2E-27286343IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MEEVEEANKA AVESCHRVLS SLSQPQDQVQ RRNLVVETGE AVFRFKRVVS LLNTGLGHAR  60
VRKLKKLPIS LPQSILLDNP NCSRTGTDQT PSKTPLFLQS SCFPENSLQE MGSNVKSSLC  120
LGNPSLELSS SGKNPIQLSQ QPNPAAHYHF LHQQQQQQQR LLLHQQQQMK QQAEMLFRKS  180
NSGINLNFDS SSCTPTMSST RSFISSLSID GSVANLDGSA FHLIGAPRSS DQNSQHKRKC  240
SVRGEDGSVK CGSSGRCHCS KKRKHRVKRS IKVPAISNKL ADIPPDDYSW RKYGQKPIKG  300
SPHPRGYYKC SSMRGCPARK HVERCLEDPS MLIVTYEGEH NHPRIQPQSA NT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-21277342771WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00284DAPTransfer from AT2G30590Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100083.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7325230.0KP732523.1 Morus alba transcription factor WRKY21-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100083.10.0probable WRKY transcription factor 21
SwissprotO043361e-129WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLW9RBZ30.0W9RBZ3_9ROSA; Putative WRKY transcription factor 21
STRINGXP_010100083.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.13e-91WRKY DNA-binding protein 39